BLASTX nr result

ID: Coptis25_contig00018629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018629
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634913.1| PREDICTED: uncharacterized protein LOC100243...   219   3e-55
ref|XP_002263023.2| PREDICTED: uncharacterized protein LOC100243...   219   3e-55
ref|XP_002527685.1| conserved hypothetical protein [Ricinus comm...   188   1e-45
gb|AAO22674.1| unknown protein [Arabidopsis thaliana]                 184   1e-44
ref|NP_001185391.1| uncharacterized protein [Arabidopsis thalian...   183   3e-44

>ref|XP_003634913.1| PREDICTED: uncharacterized protein LOC100243690 isoform 2 [Vitis
           vinifera]
          Length = 346

 Score =  219 bits (559), Expect = 3e-55
 Identities = 122/200 (61%), Positives = 144/200 (72%), Gaps = 2/200 (1%)
 Frame = +3

Query: 108 HYYFTPSLP--TRLKYPLLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLEL 281
           H  FT   P  T+  YP+    S +  K  +G   S SHS++S  G+ +FDP+LR VLEL
Sbjct: 7   HLSFTLLHPHSTKPNYPIFRSRSPST-KITLGLVFS-SHSSISRNGQGAFDPELRPVLEL 64

Query: 282 ATDSELYELEHILFGPSYFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXXSRFMYLA 461
           ATDSEL+ELE ILFGPSYFSPLLKS+ S +ADVDY  I               SRF++LA
Sbjct: 65  ATDSELFELERILFGPSYFSPLLKSI-SRRADVDYAMIEEDLEEREDFISSLESRFLFLA 123

Query: 462 ADARSTLRGWRPSYREILLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQ 641
           ADARSTLRGWRPSYR +LLGVRKKL+VPCSSKLSTEDLEVEIFLHL+Q+YSS E+G  S+
Sbjct: 124 ADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHLLQDYSSEESGALSK 183

Query: 642 SWENSMVSNSHHGLELGLNK 701
           SWENS  S SH  LE GL++
Sbjct: 184 SWENSKASTSHGNLEFGLSQ 203


>ref|XP_002263023.2| PREDICTED: uncharacterized protein LOC100243690 isoform 1 [Vitis
           vinifera] gi|296088813|emb|CBI38263.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score =  219 bits (559), Expect = 3e-55
 Identities = 122/200 (61%), Positives = 144/200 (72%), Gaps = 2/200 (1%)
 Frame = +3

Query: 108 HYYFTPSLP--TRLKYPLLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLEL 281
           H  FT   P  T+  YP+    S +  K  +G   S SHS++S  G+ +FDP+LR VLEL
Sbjct: 7   HLSFTLLHPHSTKPNYPIFRSRSPST-KITLGLVFS-SHSSISRNGQGAFDPELRPVLEL 64

Query: 282 ATDSELYELEHILFGPSYFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXXSRFMYLA 461
           ATDSEL+ELE ILFGPSYFSPLLKS+ S +ADVDY  I               SRF++LA
Sbjct: 65  ATDSELFELERILFGPSYFSPLLKSI-SRRADVDYAMIEEDLEEREDFISSLESRFLFLA 123

Query: 462 ADARSTLRGWRPSYREILLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQ 641
           ADARSTLRGWRPSYR +LLGVRKKL+VPCSSKLSTEDLEVEIFLHL+Q+YSS E+G  S+
Sbjct: 124 ADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHLLQDYSSEESGALSK 183

Query: 642 SWENSMVSNSHHGLELGLNK 701
           SWENS  S SH  LE GL++
Sbjct: 184 SWENSKASTSHGNLEFGLSQ 203


>ref|XP_002527685.1| conserved hypothetical protein [Ricinus communis]
           gi|223532916|gb|EEF34684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 372

 Score =  188 bits (477), Expect = 1e-45
 Identities = 98/166 (59%), Positives = 116/166 (69%)
 Frame = +3

Query: 204 VSCSHSAVSTRGKASFDPDLRLVLELATDSELYELEHILFGPSYFSPLLKSVTSSKADVD 383
           + CSH+AVS     + D +LR VLELATDSELYELE ILFGPSYFSPLLKS+T +  DV+
Sbjct: 66  IRCSHAAVS----GTLDRELRSVLELATDSELYELERILFGPSYFSPLLKSITGNGVDVE 121

Query: 384 YFTIGXXXXXXXXXXXXXXSRFMYLAADARSTLRGWRPSYREILLGVRKKLSVPCSSKLS 563
           Y T                SRF+YLAADARSTLRGWRPSYR +LL VRKKL++PCS KL 
Sbjct: 122 YSTFEDDMAEREAFIAALESRFLYLAADARSTLRGWRPSYRNVLLAVRKKLNIPCSRKLP 181

Query: 564 TEDLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELGLNK 701
           TEDLE EIFLHL+Q++ S E+G     WE S V +    LE+GL +
Sbjct: 182 TEDLEAEIFLHLLQDHPSEESGTVPGLWEFSEVPSDQGSLEIGLRQ 227


>gb|AAO22674.1| unknown protein [Arabidopsis thaliana]
          Length = 350

 Score =  184 bits (467), Expect = 1e-44
 Identities = 99/183 (54%), Positives = 126/183 (68%)
 Frame = +3

Query: 153 LLNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLELATDSELYELEHILFGPS 332
           +L +P     + ++GFA++ S +A  +  +A++DP+LRLV ELATDSELYELE ILFGPS
Sbjct: 26  ILKIPRTGWRRKQLGFALA-STAASESPSEATYDPELRLVFELATDSELYELEKILFGPS 84

Query: 333 YFSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXXSRFMYLAADARSTLRGWRPSYREI 512
           YFSPLLKS+ + K   D   IG              SRF++LAADARSTLRGWRPSYR +
Sbjct: 85  YFSPLLKSIPN-KGGGDRLMIGQDIEVRDGFIEALESRFLFLAADARSTLRGWRPSYRNV 143

Query: 513 LLGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELG 692
           LL VR  L++PCSS+L TEDLE EIFL+L+  +SS  +G     WENS VS +   LELG
Sbjct: 144 LLAVRNNLNIPCSSQLPTEDLEAEIFLYLVDNFSSEASGVFPGMWENSEVSEAEGSLELG 203

Query: 693 LNK 701
           L+K
Sbjct: 204 LSK 206


>ref|NP_001185391.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332197345|gb|AEE35466.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 357

 Score =  183 bits (465), Expect = 3e-44
 Identities = 99/182 (54%), Positives = 125/182 (68%)
 Frame = +3

Query: 156 LNLPSFTLHKTRVGFAVSCSHSAVSTRGKASFDPDLRLVLELATDSELYELEHILFGPSY 335
           L +P     + ++GFA++ S +A  +  +A++DP+LRLV ELATDSELYELE ILFGPSY
Sbjct: 28  LQIPRTGWRRKQLGFALA-STAASESPSEATYDPELRLVFELATDSELYELEKILFGPSY 86

Query: 336 FSPLLKSVTSSKADVDYFTIGXXXXXXXXXXXXXXSRFMYLAADARSTLRGWRPSYREIL 515
           FSPLLKS+ + K   D   IG              SRF++LAADARSTLRGWRPSYR +L
Sbjct: 87  FSPLLKSIPN-KGGGDRLMIGQDIEVRDGFIEALESRFLFLAADARSTLRGWRPSYRNVL 145

Query: 516 LGVRKKLSVPCSSKLSTEDLEVEIFLHLIQEYSSGETGHASQSWENSMVSNSHHGLELGL 695
           L VR  L++PCSS+L TEDLE EIFL+L+  +SS  +G     WENS VS +   LELGL
Sbjct: 146 LAVRNNLNIPCSSQLPTEDLEAEIFLYLVDNFSSEASGVFPGMWENSEVSEAEGSLELGL 205

Query: 696 NK 701
           +K
Sbjct: 206 SK 207


Top