BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018626
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20615.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002278710.1| PREDICTED: uncharacterized protein LOC100247...   136   2e-30
ref|XP_002309516.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002516471.1| conserved hypothetical protein [Ricinus comm...   120   1e-25
ref|XP_003589035.1| DNA-directed RNA polymerase [Medicago trunca...   119   3e-25

>emb|CBI20615.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/131 (55%), Positives = 90/131 (68%), Gaps = 5/131 (3%)
 Frame = +3

Query: 3   EVYAIQACGGQMTVDGKRARNGGGILWNILKTREPRAYKEIMTKGKELEKQFRKQNFRQG 182
           EV AIQACGGQMT DGKR+R GGGILW+I+K R+P AYKEIM +GKE EKQFR+ N +Q 
Sbjct: 84  EVDAIQACGGQMTADGKRSRTGGGILWSIIKVRDPNAYKEIMKRGKEFEKQFRQPNSKQP 143

Query: 183 PTQDKDVHYSERIAHAPSDQIEDQASDGSQ----IQDE-GRPSSDNGRVSALSRIRVPVD 347
           P Q+K+   S+ I H   D      SDGSQ    +QD+  +P++   RVS  +R+RVPV 
Sbjct: 144 PAQNKEAS-SQNIVHTSIDDTAINVSDGSQLTPPVQDQLEQPNAGGNRVSVHNRMRVPVT 202

Query: 348 YADLLGEEVKD 380
           Y DLL E  KD
Sbjct: 203 YDDLLVENPKD 213


>ref|XP_002278710.1| PREDICTED: uncharacterized protein LOC100247482 [Vitis vinifera]
          Length = 258

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/131 (55%), Positives = 90/131 (68%), Gaps = 5/131 (3%)
 Frame = +3

Query: 3   EVYAIQACGGQMTVDGKRARNGGGILWNILKTREPRAYKEIMTKGKELEKQFRKQNFRQG 182
           EV AIQACGGQMT DGKR+R GGGILW+I+K R+P AYKEIM +GKE EKQFR+ N +Q 
Sbjct: 128 EVDAIQACGGQMTADGKRSRTGGGILWSIIKVRDPNAYKEIMKRGKEFEKQFRQPNSKQP 187

Query: 183 PTQDKDVHYSERIAHAPSDQIEDQASDGSQ----IQDE-GRPSSDNGRVSALSRIRVPVD 347
           P Q+K+   S+ I H   D      SDGSQ    +QD+  +P++   RVS  +R+RVPV 
Sbjct: 188 PAQNKEAS-SQNIVHTSIDDTAINVSDGSQLTPPVQDQLEQPNAGGNRVSVHNRMRVPVT 246

Query: 348 YADLLGEEVKD 380
           Y DLL E  KD
Sbjct: 247 YDDLLVENPKD 257


>ref|XP_002309516.1| predicted protein [Populus trichocarpa] gi|222855492|gb|EEE93039.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/131 (53%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
 Frame = +3

Query: 3   EVYAIQACGGQMTVDGKRARNGGGILWNILKTREPRAYKEIMTKGKELEKQFRKQNFRQG 182
           EVYAIQ+CGGQMTVDG+R R GGGILWNI+KTREP AYKEIM K KE EKQFR+Q  R+ 
Sbjct: 113 EVYAIQSCGGQMTVDGRRFRTGGGILWNIMKTREPMAYKEIMKKAKEFEKQFRQQPIRRA 172

Query: 183 PTQDKDVHYSERIAHAPSDQIEDQASDGSQIQ-----DEGRPSSDNGRVSALSRIRVPVD 347
           P Q+ +   S+  A    D       D SQ +        + S+D  R S   RIRVPV 
Sbjct: 173 PEQNNECS-SQIAASGFIDDTPVSVPDSSQKELAPQYQHEQSSADEKRKSVHERIRVPVS 231

Query: 348 YADLLGEEVKD 380
           Y DLLG+++K+
Sbjct: 232 YDDLLGDDLKN 242


>ref|XP_002516471.1| conserved hypothetical protein [Ricinus communis]
           gi|223544291|gb|EEF45812.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   EVYAIQACGGQMTVDGKRARNGGGILWNILKTREPRAYKEIMTKGKELEKQFRKQNFRQG 182
           EV A+ +CGGQMT DG R R GGGILWNI+KT+EP+AY+EIM K KE EKQFR+QN R  
Sbjct: 126 EVDAVLSCGGQMTADGGRFRTGGGILWNIVKTKEPKAYQEIMKKTKEFEKQFRRQNSRPA 185

Query: 183 PTQDKDVHYSERIAHAPSDQIEDQASDGSQI--QDEGRPSSDNGRVSALSRIRVPVDYAD 356
           P Q+K+    E +       +    +D   +      +PS++   +    RIRVPV Y D
Sbjct: 186 PQQNKEGSSQETVVSISDGALSSVPNDSQPVPQNQHEQPSTERKHIPVHDRIRVPVSYDD 245

Query: 357 LLGEEVKD 380
           LLG++ K+
Sbjct: 246 LLGDDPKN 253


>ref|XP_003589035.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355478083|gb|AES59286.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 326

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 6/130 (4%)
 Frame = +3

Query: 9   YAIQACGGQMTVDGKRARNGGGILWNILKTREPRAYKEIMTKGKELEKQFRKQNFRQGPT 188
           YAIQ+CGGQ T DGKR R GGG+LWNI+K REP AYKEIM K +E EKQFR+ +F+Q P+
Sbjct: 193 YAIQSCGGQQTADGKRFRTGGGVLWNIIKVREPNAYKEIMKKAREFEKQFRQPSFKQ-PS 251

Query: 189 QDKDVHYSERI----AHAPSDQIEDQASDGSQIQDEGR-PSSDNGRVSALSRIRVPVDY- 350
             K+   S+ +    + A    + D  +  SQ+QD+ + P S+  RV    R+R+PV Y 
Sbjct: 252 MQKEEDSSQVVPCPSSSAHQGNVSDNPTCASQLQDQDKPPGSEKKRVPVRDRLRIPVSYD 311

Query: 351 ADLLGEEVKD 380
            DLLG  V++
Sbjct: 312 DDLLGATVEN 321