BLASTX nr result

ID: Coptis25_contig00018604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018604
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitoc...   379   e-102
gb|AFK40357.1| unknown [Lotus japonicus]                              377   e-102
ref|XP_002520006.1| conserved hypothetical protein [Ricinus comm...   376   e-101
ref|XP_003540197.1| PREDICTED: altered inheritance rate of mitoc...   375   e-101
ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitoc...   375   e-101

>ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitochondria protein 25-like
            [Vitis vinifera] gi|297737362|emb|CBI26563.3| unnamed
            protein product [Vitis vinifera]
          Length = 412

 Score =  379 bits (974), Expect = e-102
 Identities = 180/247 (72%), Positives = 207/247 (83%)
 Frame = +2

Query: 515  LSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAP 694
            LSQS TG L+P SPEE +VAPLLAR+NL++TR+IEWANL++GFEQENRYA+VD  YPQ+P
Sbjct: 166  LSQSVTGFLEPASPEEARVAPLLARSNLLITRDIEWANLVLGFEQENRYAMVDVCYPQSP 225

Query: 695  VGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXX 874
            VGFI EQS++I RQ+LR RRPF+AYI D+MGNELFRVRRPFWW+TS+I+ E++GKE+G  
Sbjct: 226  VGFIREQSNVIMRQLLRLRRPFVAYIVDAMGNELFRVRRPFWWITSSIYAEVNGKEVGVV 285

Query: 875  XXXXXXXXXXYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTD 1054
                      YDLYLGNKQFA VENPGFWNWTF LKDIDG VLAEIDRD+RGFG E+ TD
Sbjct: 286  HRRWHLWRRVYDLYLGNKQFAAVENPGFWNWTFTLKDIDGKVLAEIDRDWRGFGFEIFTD 345

Query: 1055 AGQYVIRFGDVDHKSKTGPASKIQDLEVGCPLMLSERAVALALAVSLDNDYFSRHGGWGL 1234
            AGQYVIRFG  D  SK+GPA  IQ+LEV  PL LSERAVA+ALAVSLDNDYFSRHGGWG+
Sbjct: 346  AGQYVIRFGSSDPNSKSGPAKAIQELEVVRPLTLSERAVAVALAVSLDNDYFSRHGGWGI 405

Query: 1235 PFFLVTE 1255
            PF  V E
Sbjct: 406  PFVAVDE 412


>gb|AFK40357.1| unknown [Lotus japonicus]
          Length = 280

 Score =  377 bits (967), Expect = e-102
 Identities = 180/247 (72%), Positives = 207/247 (83%)
 Frame = +2

Query: 515  LSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAP 694
            +SQS TG L+P SP+E  VAPLLAR+NL++TR+IEWANL++GFEQENRYA+VDA YPQ+P
Sbjct: 34   VSQSVTGFLEPHSPQEAMVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSP 93

Query: 695  VGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXX 874
            VGF+ EQS++I RQ+LR RRPF+AYITD+MGNELFRVRRPFWW+TS+I+ EIDGKEIG  
Sbjct: 94   VGFMREQSNVITRQLLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVV 153

Query: 875  XXXXXXXXXXYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTD 1054
                      YDLYLGNKQFAVVENPG WNWTF LKDI+G VL +IDRD+RGFG E+LTD
Sbjct: 154  HRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLGQIDRDWRGFGFEILTD 213

Query: 1055 AGQYVIRFGDVDHKSKTGPASKIQDLEVGCPLMLSERAVALALAVSLDNDYFSRHGGWGL 1234
            AGQYVIRFG  D  SK G A  IQDLEV  PL L+ERAVA+ALA+SLDNDYFSRHGGWGL
Sbjct: 214  AGQYVIRFGSSDPSSKIGLAFAIQDLEVSRPLTLAERAVAVALAISLDNDYFSRHGGWGL 273

Query: 1235 PFFLVTE 1255
            PF  VTE
Sbjct: 274  PFMAVTE 280


>ref|XP_002520006.1| conserved hypothetical protein [Ricinus communis]
            gi|223540770|gb|EEF42330.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 400

 Score =  376 bits (965), Expect = e-101
 Identities = 192/315 (60%), Positives = 228/315 (72%), Gaps = 15/315 (4%)
 Frame = +2

Query: 356  LSRNYIVKNWLADMTRENNARHLRKKRNAQTSRTLSS---------HDIS---TGEXXXX 499
            L+RN + + W+ D   E   R  RKK     +    +         H I+   +G     
Sbjct: 86   LNRNLLAQLWIEDKKLEKLIRKRRKKIAKHDNHGSDAVYDRHRFFQHPIARQFSGGNMRE 145

Query: 500  XXXXXL---SQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVV 670
                 L   SQS +  LKP SPEE K+APLLAR+NL++TR+IEWANL++GFEQENRYA+V
Sbjct: 146  ERSFDLPPPSQSVSAFLKPNSPEEAKIAPLLARSNLLITRDIEWANLVLGFEQENRYAMV 205

Query: 671  DAYYPQAPVGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEI 850
            D  YPQ+PVGFI EQS+++ARQ+LR RRPF+AYI D+MGNELFRVRRPFWWVTS+I+ EI
Sbjct: 206  DVCYPQSPVGFIREQSNVLARQLLRLRRPFVAYIMDAMGNELFRVRRPFWWVTSSIYAEI 265

Query: 851  DGKEIGXXXXXXXXXXXXYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRG 1030
            DGKE+G            YDLYLGN+QFAVVENPG WNWTF LKDI+G VLA+IDRD+RG
Sbjct: 266  DGKEVGVVHRRWHLWRRIYDLYLGNQQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRG 325

Query: 1031 FGLELLTDAGQYVIRFGDVDHKSKTGPASKIQDLEVGCPLMLSERAVALALAVSLDNDYF 1210
            FG E+ TDAGQYVIRFG  D  SKTGPA+ IQ+LEV  PL LSERAVA+ALA+SLDNDYF
Sbjct: 326  FGFEIFTDAGQYVIRFGSSDPSSKTGPAAAIQELEVARPLTLSERAVAVALAISLDNDYF 385

Query: 1211 SRHGGWGLPFFLVTE 1255
            SRH GWGLPF  V E
Sbjct: 386  SRHSGWGLPFVAVGE 400


>ref|XP_003540197.1| PREDICTED: altered inheritance rate of mitochondria protein 25-like
            [Glycine max]
          Length = 349

 Score =  375 bits (964), Expect = e-101
 Identities = 186/302 (61%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
 Frame = +2

Query: 356  LSRNYIVKNWLADMTRENNARHLRKKRNAQTSRTLSSHDI--STGEXXXXXXXXXLSQSA 529
            L+R ++VK W+ D    N    ++        R  S+        +         +SQS 
Sbjct: 48   LTREFLVKLWVDDRKMRNPRDRVKSFGGYGDPRWFSATSAVPRRPKRRAVLKQPPISQSV 107

Query: 530  TGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVDAYYPQAPVGFIS 709
            +    P SPEE KVAPLLAR+NL++TR+IEWANL++GFEQENRYA+VDA YPQ+PVGFI 
Sbjct: 108  SDFFDPQSPEEAKVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSPVGFIR 167

Query: 710  EQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEIDGKEIGXXXXXXX 889
            EQS++IARQ+LR RRPF+AYITD++GNELFRVRRPFWW+TS+I+ EIDGKE+G       
Sbjct: 168  EQSNIIARQLLRLRRPFVAYITDALGNELFRVRRPFWWITSSIYAEIDGKEVGVVHRRWH 227

Query: 890  XXXXXYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGFGLELLTDAGQYV 1069
                 YDLYLGNKQFAVVENPG WNWTF LKDI+G VLA+IDRD+RGFG E+LTDAGQYV
Sbjct: 228  LWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEILTDAGQYV 287

Query: 1070 IRFGDVDHKSKTGPASKIQDLEVGCPLMLSERAVALALAVSLDNDYFSRHGGWGLPFFLV 1249
            IRFG  D  SK G AS I+DLEV   L L+ERAV +ALA+SLDNDYFSRHGGWGLPFF+ 
Sbjct: 288  IRFGSSDPSSKIGLASAIEDLEVSRKLTLAERAVTVALAISLDNDYFSRHGGWGLPFFVA 347

Query: 1250 TE 1255
             E
Sbjct: 348  EE 349


>ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitochondria protein 25-like
            [Cucumis sativus] gi|449518823|ref|XP_004166435.1|
            PREDICTED: altered inheritance rate of mitochondria
            protein 25-like [Cucumis sativus]
          Length = 366

 Score =  375 bits (962), Expect = e-101
 Identities = 188/314 (59%), Positives = 226/314 (71%), Gaps = 14/314 (4%)
 Frame = +2

Query: 356  LSRNYIVKNWLADMTRENNARHLRKKRNAQTSRTLSSHDI--------------STGEXX 493
            + R+++ K W AD   E +    ++ R     R  + + I              +T    
Sbjct: 53   IDRSFLAKLWEADRKLEGSREKRKRHRIGNYDRNGTQNRIGQYDRTPFGKPTLDATFVEG 112

Query: 494  XXXXXXXLSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYAVVD 673
                    SQS +G L+P SPEE +VAPLLAR+NL++TR+IEWANL+ GFEQENRYA+VD
Sbjct: 113  KPWKQPPPSQSVSGFLEPHSPEEVRVAPLLARSNLLITRDIEWANLVFGFEQENRYAIVD 172

Query: 674  AYYPQAPVGFISEQSSMIARQILRTRRPFIAYITDSMGNELFRVRRPFWWVTSTIFVEID 853
              YPQ+PVG I EQSS+IARQ+LR RRPF+AYITD+MGNELFRVRRPFWW+TS+I+ E+D
Sbjct: 173  VCYPQSPVGLIREQSSIIARQLLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEVD 232

Query: 854  GKEIGXXXXXXXXXXXXYDLYLGNKQFAVVENPGFWNWTFILKDIDGNVLAEIDRDFRGF 1033
            GKEIG            YDLYLGNKQFAVVENPGFW+WTF LKDIDG VLAE+DRD+RGF
Sbjct: 233  GKEIGVVHRRWHLWRRVYDLYLGNKQFAVVENPGFWSWTFTLKDIDGKVLAEVDRDWRGF 292

Query: 1034 GLELLTDAGQYVIRFGDVDHKSKTGPASKIQDLEVGCPLMLSERAVALALAVSLDNDYFS 1213
            G E+ TDAGQYVIRFG  D  S+TG A ++Q+LEV   L LSERAVA+ALA+SLDNDYFS
Sbjct: 293  GFEIFTDAGQYVIRFGASDPVSRTGAAREVQELEVARHLTLSERAVAVALAISLDNDYFS 352

Query: 1214 RHGGWGLPFFLVTE 1255
            RHGGWGLPF  V E
Sbjct: 353  RHGGWGLPFVAVGE 366


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