BLASTX nr result

ID: Coptis25_contig00018597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018597
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like is...   188   3e-46
ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...   188   3e-46
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46
ref|XP_002526576.1| Cell division control protein, putative [Ric...   186   1e-45
ref|XP_002263924.2| PREDICTED: ALA-interacting subunit 1, partia...   182   3e-44

>ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis
           sativus] gi|449501692|ref|XP_004161439.1| PREDICTED:
           ALA-interacting subunit 5-like isoform 2 [Cucumis
           sativus]
          Length = 337

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/135 (71%), Positives = 107/135 (79%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 LASLFASQQVVEIVERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVY 223
           +ASLFAS+QVVEIV++YD DC+ S F      FIK S TNKTC +KL V K MK PV+VY
Sbjct: 69  IASLFASEQVVEIVDQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVY 128

Query: 222 YQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDT 46
           YQ+D+FYQNHRRYVKSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDT
Sbjct: 129 YQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDT 188

Query: 45  YGFSVKNKVLEVSKK 1
           YGFS+KNK L+VSKK
Sbjct: 189 YGFSMKNKALQVSKK 203


>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/135 (71%), Positives = 107/135 (79%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 LASLFASQQVVEIVERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVY 223
           +ASLFAS+QVVEIV++YD DC+ S F      FIK S TNKTC +KL V K MK PV+VY
Sbjct: 69  IASLFASEQVVEIVDQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVY 128

Query: 222 YQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDT 46
           YQ+D+FYQNHRRYVKSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDT
Sbjct: 129 YQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDT 188

Query: 45  YGFSVKNKVLEVSKK 1
           YGFS+KNK L+VSKK
Sbjct: 189 YGFSMKNKALQVSKK 203


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  188 bits (477), Expect = 5e-46
 Identities = 92/135 (68%), Positives = 110/135 (81%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 LASLFASQQVVEIVERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVY 223
           LASL+AS+ VVEIVERYD DCI   + +    +I+ S+ NKTC   + V KHMKSPVF+Y
Sbjct: 66  LASLYASEHVVEIVERYDKDCIPPDYRNNSLHYIQTSEINKTCTMTINVPKHMKSPVFIY 125

Query: 222 YQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDT 46
           Y++D+FYQNHRRYVKSRSDKQLRSK  E +T TC+PEA T+NG PIVPCGL+AWSLFNDT
Sbjct: 126 YELDNFYQNHRRYVKSRSDKQLRSKASEGVTETCKPEAVTSNGQPIVPCGLVAWSLFNDT 185

Query: 45  YGFSVKNKVLEVSKK 1
           Y FSVK +VL+VSKK
Sbjct: 186 YRFSVKKEVLDVSKK 200


>ref|XP_002526576.1| Cell division control protein, putative [Ricinus communis]
           gi|223534070|gb|EEF35788.1| Cell division control
           protein, putative [Ricinus communis]
          Length = 386

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/135 (66%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 LASLFASQQVVEIVERYDSDCISSSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVY 223
           L +LFAS++VVEIV+RYD DCI  ++ ++  ++I+ S+TNKTC + L + K MKSPVF+Y
Sbjct: 63  LTTLFASERVVEIVDRYDKDCIPHNYQNESLEYIQSSNTNKTCTRSLTIPKQMKSPVFIY 122

Query: 222 YQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKT-NNGPIVPCGLIAWSLFNDT 46
           Y++D+FYQNHRRYVKSRSDKQLRSK  E  T +C+PEA T +N PIVPCGLIAWSLFNDT
Sbjct: 123 YELDNFYQNHRRYVKSRSDKQLRSKAGETNTDSCKPEAVTPSNAPIVPCGLIAWSLFNDT 182

Query: 45  YGFSVKNKVLEVSKK 1
           YGFS+KNK L VSKK
Sbjct: 183 YGFSLKNKALYVSKK 197


>ref|XP_002263924.2| PREDICTED: ALA-interacting subunit 1, partial [Vitis vinifera]
          Length = 304

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/135 (65%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
 Frame = -1

Query: 399 LASLFASQQVVEIVERYDSDCISSSF-SDKEDFIKRSDTNKTCIKKLLVHKHMKSPVFVY 223
           LASLFAS++VVEIV RYD+DC+ +S+ +D   +I+ ++TNKTC +  LV K MKSPV++Y
Sbjct: 36  LASLFASERVVEIVHRYDTDCVPASYRNDMLAYIQSNETNKTCTRTFLVPKQMKSPVYIY 95

Query: 222 YQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNN-GPIVPCGLIAWSLFNDT 46
           YQ+D+FYQNHRRYVKSRSDKQLRS+  E+ T++C+PE  T+N   IVPCGLIAWSLFNDT
Sbjct: 96  YQLDNFYQNHRRYVKSRSDKQLRSRASENDTSSCDPEDVTSNKSAIVPCGLIAWSLFNDT 155

Query: 45  YGFSVKNKVLEVSKK 1
           YGFSV N +L VSKK
Sbjct: 156 YGFSVNNTLLGVSKK 170


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