BLASTX nr result

ID: Coptis25_contig00018589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018589
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877111.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   133   1e-29
ref|XP_002281420.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   131   5e-29
ref|XP_004168311.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   130   9e-29
ref|XP_002467256.1| hypothetical protein SORBIDRAFT_01g022150 [S...   129   2e-28
ref|XP_003543632.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   129   3e-28

>ref|XP_002877111.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297322949|gb|EFH53370.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 316

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/100 (68%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
 Frame = +2

Query: 194 RFL--NEKNMDNSYIRLKKSDLWTGFDPTRVIQLSWQPRAFLHKNFLSDEECDHLINLAK 367
           RFL  +  N D S I++K S    GFDPTRV QLSW PRAFL+K FLSDEECDH I LAK
Sbjct: 26  RFLTRSSNNRDGSVIKMKTSASSFGFDPTRVTQLSWTPRAFLYKGFLSDEECDHFIKLAK 85

Query: 368 DKLEVSMVADNDSGKSVKSEVRTSSGMFLDKKQDEVVETI 487
            KLE SMVADNDSG+SV+SEVRTSSGMFL K+QD++V  +
Sbjct: 86  GKLEKSMVADNDSGESVESEVRTSSGMFLSKRQDDIVANV 125


>ref|XP_002281420.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1 [Vitis vinifera]
           gi|296087745|emb|CBI35001.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/97 (68%), Positives = 76/97 (78%)
 Frame = +2

Query: 197 FLNEKNMDNSYIRLKKSDLWTGFDPTRVIQLSWQPRAFLHKNFLSDEECDHLINLAKDKL 376
           ++ EK    S + LK     +GFDPTRV QLSW+PRAFL+K FLS+EECDHLI LAKDKL
Sbjct: 27  WVGEKKTGGSVLGLKPRGFASGFDPTRVTQLSWRPRAFLYKGFLSEEECDHLITLAKDKL 86

Query: 377 EVSMVADNDSGKSVKSEVRTSSGMFLDKKQDEVVETI 487
           E SMVADN+SGKS+ SEVRTSSGMFL K QDE+V  I
Sbjct: 87  EKSMVADNESGKSIMSEVRTSSGMFLLKAQDEIVADI 123


>ref|XP_004168311.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Cucumis
           sativus]
          Length = 313

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/90 (75%), Positives = 71/90 (78%)
 Frame = +2

Query: 209 KNMDNSYIRLKKSDLWTGFDPTRVIQLSWQPRAFLHKNFLSDEECDHLINLAKDKLEVSM 388
           K    S +RLK       FDPTRV QLSWQPRAFL+K FLSD ECDHLI+LAKDKLE SM
Sbjct: 30  KQSSGSVLRLKTDSSPLIFDPTRVTQLSWQPRAFLYKGFLSDAECDHLIDLAKDKLEKSM 89

Query: 389 VADNDSGKSVKSEVRTSSGMFLDKKQDEVV 478
           VADNDSGKSV SEVRTSSGMFL K QDEVV
Sbjct: 90  VADNDSGKSVSSEVRTSSGMFLRKAQDEVV 119


>ref|XP_002467256.1| hypothetical protein SORBIDRAFT_01g022150 [Sorghum bicolor]
           gi|241921110|gb|EER94254.1| hypothetical protein
           SORBIDRAFT_01g022150 [Sorghum bicolor]
          Length = 303

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/75 (84%), Positives = 69/75 (92%)
 Frame = +2

Query: 263 FDPTRVIQLSWQPRAFLHKNFLSDEECDHLINLAKDKLEVSMVADNDSGKSVKSEVRTSS 442
           FDP+RV+QLSW+PRAFLHK FLSD ECDHLI LAKDKLE SMVADN+SGKSV+SEVRTSS
Sbjct: 35  FDPSRVVQLSWRPRAFLHKGFLSDAECDHLIVLAKDKLEKSMVADNESGKSVQSEVRTSS 94

Query: 443 GMFLDKKQDEVVETI 487
           GMFL+KKQDEVV  I
Sbjct: 95  GMFLEKKQDEVVRGI 109


>ref|XP_003543632.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max]
          Length = 318

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/93 (69%), Positives = 72/93 (77%)
 Frame = +2

Query: 209 KNMDNSYIRLKKSDLWTGFDPTRVIQLSWQPRAFLHKNFLSDEECDHLINLAKDKLEVSM 388
           K    S +RL +      FDPTRV QLSW PRAFL+K FLSDEECDHLI LAKDKLE SM
Sbjct: 33  KATHGSVLRLNRGGSSVKFDPTRVTQLSWSPRAFLYKGFLSDEECDHLITLAKDKLEKSM 92

Query: 389 VADNDSGKSVKSEVRTSSGMFLDKKQDEVVETI 487
           VADN+SGKS+ SEVRTSSGMFL+K QDE+V  I
Sbjct: 93  VADNESGKSIMSEVRTSSGMFLNKAQDEIVAGI 125


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