BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018570
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucu...    74   1e-11
ref|XP_002319145.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    71   1e-10
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...    71   1e-10
emb|CBI36672.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucumis sativus]
          Length = 359

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = +2

Query: 104 ETIVGPTVNKDVSHEDVGLKRATLAPKEMPMIKKNSPVLQIKLAAKPIHNEDKYDADNMN 283
           ETIVGP ++KDV+HE VG+K +TL PKE+PMIKK +PV+QI++A K IH+       N+N
Sbjct: 166 ETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDG---KVGNIN 222

Query: 284 ESGE 295
             GE
Sbjct: 223 NDGE 226


>ref|XP_002319145.1| predicted protein [Populus trichocarpa] gi|222857521|gb|EEE95068.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/90 (46%), Positives = 51/90 (56%)
 Frame = +2

Query: 29  DEDEDKSGLVDAHXXXXXXXXXXXXETIVGPTVNKDVSHEDVGLKRATLAPKEMPMIKKN 208
           DE+ D      A             + IVGP  +KDV HE VGLK A+L PKE+P+IKK 
Sbjct: 127 DEEVDDKAPYGASGAVKQRRKRIKRKAIVGPAADKDVVHESVGLKPASLVPKEIPIIKKK 186

Query: 209 SPVLQIKLAAKPIHNEDKYDADNMNESGEP 298
           + VLQIK+A K  HNE K D   M ES +P
Sbjct: 187 NTVLQIKIAPKVTHNEYK-DDSIMTESEDP 215


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = +2

Query: 104 ETIVGPTVNKDVSHEDVGLKRATLAPKEMPMIKKNSPVLQIKLAAKPIHNEDKYDADNMN 283
           E I GP V+KDV+HE VG+K ATL PKE+PMIKK +PVLQIK+A K I  E K +   M 
Sbjct: 269 EAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVI-TEHKDECSIMK 327

Query: 284 ES 289
           ES
Sbjct: 328 ES 329


>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = +2

Query: 104 ETIVGPTVNKDVSHEDVGLKRATLAPKEMPMIKKNSPVLQIKLAAKPIHNEDKYDADNMN 283
           E IVGP V+KDV+HE VG+K ATL PKE+PMIKK +PVLQIK+  K I  E K +   M 
Sbjct: 269 EAIVGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVI-TEHKDECSIMK 327

Query: 284 ES 289
           ES
Sbjct: 328 ES 329


>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = +2

Query: 104 ETIVGPTVNKDVSHEDVGLKRATLAPKEMPMIKKNSPVLQIKLAAKPIHNEDKYDADNMN 283
           E I GP V+KDV+HE VG+K ATL PKE+PMIKK +PVLQIK+A K I  E K +   M 
Sbjct: 69  EAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVI-TEHKDECSIMK 127

Query: 284 ES 289
           ES
Sbjct: 128 ES 129