BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018565
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   222   3e-56
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi...   197   7e-49
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47

>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  222 bits (565), Expect = 3e-56
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = -3

Query: 385 NMDLGVQAAQKLMDLMPQHDGTYVLLSNMYANVGRWADMANVRKLMRDKGVKKEPGCSWI 206
           NMDLG+QAA++L +LMPQHDGTYVLLSNMYA VGRW D+A VRKLMRDKGVKKEPGCSWI
Sbjct: 611 NMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWI 670

Query: 205 EVARKVHVFLVNDTMHPEVQEVNNFLEELGGKMRKLGYVPDTKFVLHDVGFEQKEYVLST 26
           EV  KVHVFLV+D +HPEVQ V N+LEELG KMRKLGY+PDTKFVLHD+  EQKEYVLST
Sbjct: 671 EVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLST 730

Query: 25  HSEKLAVG 2
           HSEKLAVG
Sbjct: 731 HSEKLAVG 738


>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/128 (71%), Positives = 112/128 (87%)
 Frame = -3

Query: 385 NMDLGVQAAQKLMDLMPQHDGTYVLLSNMYANVGRWADMANVRKLMRDKGVKKEPGCSWI 206
           NMDLG++AA++L  LMPQ+DGTYVLLSN+YA+VGRW D+A VRKLMRD+ V+KEP CSWI
Sbjct: 609 NMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWI 668

Query: 205 EVARKVHVFLVNDTMHPEVQEVNNFLEELGGKMRKLGYVPDTKFVLHDVGFEQKEYVLST 26
           EV  KVHVF+V+D +HPEV  V  +LE+LG +M+KLGY+PDTKFVLHD+ +EQKE+ LST
Sbjct: 669 EVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728

Query: 25  HSEKLAVG 2
           HSEKLAVG
Sbjct: 729 HSEKLAVG 736


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/127 (70%), Positives = 109/127 (85%)
 Frame = -3

Query: 385 NMDLGVQAAQKLMDLMPQHDGTYVLLSNMYANVGRWADMANVRKLMRDKGVKKEPGCSWI 206
           NMDLG++AA+KL  L+PQHDGTYVLLSNMYA++GRW D+A  RKLMRD+GVKKEP CSW 
Sbjct: 609 NMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWT 668

Query: 205 EVARKVHVFLVNDTMHPEVQEVNNFLEELGGKMRKLGYVPDTKFVLHDVGFEQKEYVLST 26
           EV  KVHVFLV+DT+HPEV  + N+LE+L  +M+K+GY+PDTK+VLHD+  E KEY LST
Sbjct: 669 EVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALST 728

Query: 25  HSEKLAV 5
           HSEKLAV
Sbjct: 729 HSEKLAV 735


>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  196 bits (497), Expect = 2e-48
 Identities = 90/128 (70%), Positives = 112/128 (87%)
 Frame = -3

Query: 385 NMDLGVQAAQKLMDLMPQHDGTYVLLSNMYANVGRWADMANVRKLMRDKGVKKEPGCSWI 206
           NMDLG++AA++L  LMPQ+DGTYVLLSN+YA+VGRW ++A VRKLMRD+ V+KEP CSWI
Sbjct: 609 NMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWI 668

Query: 205 EVARKVHVFLVNDTMHPEVQEVNNFLEELGGKMRKLGYVPDTKFVLHDVGFEQKEYVLST 26
           EV  KVHVF+V+D +HPEV  V  +LE+LG +M+KLGY+PDTKFVLHD+ +EQKE+ LST
Sbjct: 669 EVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728

Query: 25  HSEKLAVG 2
           HSEKLAVG
Sbjct: 729 HSEKLAVG 736


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/127 (70%), Positives = 108/127 (85%)
 Frame = -3

Query: 385 NMDLGVQAAQKLMDLMPQHDGTYVLLSNMYANVGRWADMANVRKLMRDKGVKKEPGCSWI 206
           NM+LG+QAA +L++LMPQ DGTY+ LSNMYA +G+W ++A VRKLMR++GVKKEPGCSWI
Sbjct: 594 NMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWI 653

Query: 205 EVARKVHVFLVNDTMHPEVQEVNNFLEELGGKMRKLGYVPDTKFVLHDVGFEQKEYVLST 26
           EV   VHVFLV+D +HPEV  V  +LE+L  +MRKLGYVPDTKFVLHD+  EQKEY LST
Sbjct: 654 EVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALST 713

Query: 25  HSEKLAV 5
           HSEKLAV
Sbjct: 714 HSEKLAV 720