BLASTX nr result

ID: Coptis25_contig00018552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018552
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618133.1| Guanine nucleotide-exchange protein-like pro...   140   9e-31
ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-...   139   2e-30
ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nuc...   139   2e-30
ref|XP_002328143.1| predicted protein [Populus trichocarpa] gi|2...   137   8e-30
ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nuc...   132   2e-28

>ref|XP_003618133.1| Guanine nucleotide-exchange protein-like protein [Medicago
           truncatula] gi|355519468|gb|AET01092.1| Guanine
           nucleotide-exchange protein-like protein [Medicago
           truncatula]
          Length = 697

 Score =  140 bits (352), Expect = 9e-31
 Identities = 74/127 (58%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
 Frame = -3

Query: 388 SRSGRIIGPSLDKIIKNVAWRKHSQLVSSCKSALDKLET-XXXXXXXXXXXXXXXXXSDA 212
           SR GR++GPSLDKIIKNVAWRKHSQLVSSCKS +DKLE+                  SDA
Sbjct: 11  SRCGRVVGPSLDKIIKNVAWRKHSQLVSSCKSTIDKLESLPECDDSDSKSPLVGIPSSDA 70

Query: 211 EFVLQPFILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNASLIEFRLIDSVCKCGGL 32
           E+VLQP  LA+DS+  K+VEPALDC FKL SLGL+RGEI +  S + F +ID++CK GGL
Sbjct: 71  EYVLQPLFLALDSAYAKVVEPALDCTFKLLSLGLVRGEIIN--SHLFFNIIDAICKSGGL 128

Query: 31  NDEILTI 11
            +E + +
Sbjct: 129 GEEAIEL 135


>ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine
           nucleotide-exchange protein 2-like [Cucumis sativus]
          Length = 1711

 Score =  139 bits (350), Expect = 2e-30
 Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
 Frame = -3

Query: 388 SRSGRIIGPSLDKIIKNVAWRKHSQLVSSCKSALDKLET-XXXXXXXXXXXXXXXXXSDA 212
           SR GR IGPSLDKI+KN AWRKHS LVSSCKS LDKL++                  +DA
Sbjct: 11  SRCGRAIGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLDSIAEAVPPDPTSPLAGLSPADA 70

Query: 211 EFVLQPFILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIE-------SNASLIEFRLIDS 53
           +FVLQP +LA+D++ +K+ EPAL+C+FKLFS GL RGEIE       SNAS I +++++S
Sbjct: 71  DFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGDANSNASSIVYKIVES 130

Query: 52  VCKCGGLNDE 23
           VCK GGL DE
Sbjct: 131 VCKSGGLGDE 140


>ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange
           protein 2-like [Cucumis sativus]
           gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin
           A-inhibited guanine nucleotide-exchange protein 2-like
           [Cucumis sativus]
          Length = 1711

 Score =  139 bits (350), Expect = 2e-30
 Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
 Frame = -3

Query: 388 SRSGRIIGPSLDKIIKNVAWRKHSQLVSSCKSALDKLET-XXXXXXXXXXXXXXXXXSDA 212
           SR GR IGPSLDKI+KN AWRKHS LVSSCKS LDKL++                  +DA
Sbjct: 11  SRCGRAIGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLDSIAEAVPPDPTSPLAGLSPADA 70

Query: 211 EFVLQPFILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIE-------SNASLIEFRLIDS 53
           +FVLQP +LA+D++ +K+ EPAL+C+FKLFS GL RGEIE       SNAS I +++++S
Sbjct: 71  DFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGDANSNASSIVYKIVES 130

Query: 52  VCKCGGLNDE 23
           VCK GGL DE
Sbjct: 131 VCKSGGLGDE 140


>ref|XP_002328143.1| predicted protein [Populus trichocarpa] gi|222837658|gb|EEE76023.1|
           predicted protein [Populus trichocarpa]
          Length = 1638

 Score =  137 bits (344), Expect = 8e-30
 Identities = 72/127 (56%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = -3

Query: 388 SRSGRIIGPSLDKIIKNVAWRKHSQLVSSCKSALDKLETXXXXXXXXXXXXXXXXXSDAE 209
           SR GR +GPSLDKI+KN AWRKHS LVSSCKS LDKLE+                 SDAE
Sbjct: 11  SRCGRSLGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLES--LTDSNSHSPLFGLSPSDAE 68

Query: 208 FVLQPFILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNA-SLIEFRLIDSVCKCGGL 32
           FVL P +LA+DS+ +K+V+PAL+CLFKLFS GLIRGEI++ + ++I F++I+SVCK  G+
Sbjct: 69  FVLHPILLALDSAYVKVVDPALECLFKLFSSGLIRGEIDNGSKNVIIFKIIESVCKVCGI 128

Query: 31  NDEILTI 11
            DE + +
Sbjct: 129 GDEAVEL 135


>ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange
           protein 2-like [Vitis vinifera]
          Length = 1702

 Score =  132 bits (333), Expect = 2e-28
 Identities = 71/128 (55%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = -3

Query: 391 NSRSGRIIGPSLDKIIKNVAWRKHSQLVSSCKSALDKLET-XXXXXXXXXXXXXXXXXSD 215
           +SR+GR++GPSLDKIIKNVAWRKHSQLV++CKS LDKLET                  SD
Sbjct: 8   SSRAGRVLGPSLDKIIKNVAWRKHSQLVAACKSVLDKLETLADSSDPNSNSPVFGLSVSD 67

Query: 214 AEFVLQPFILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNASLIEFRLIDSVCKCGG 35
           AEFVLQP +LA+DS+S K++EPAL+CLFKL SLGLIRG I+         +ID+VCK  G
Sbjct: 68  AEFVLQPLLLALDSASAKVMEPALECLFKLCSLGLIRGVIDRKG------MIDAVCKSAG 121

Query: 34  LNDEILTI 11
             ++ + +
Sbjct: 122 SGEDAVDL 129


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