BLASTX nr result

ID: Coptis25_contig00018550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018550
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444624.1| hypothetical protein SORBIDRAFT_07g024980 [S...    64   1e-08
ref|XP_002438950.1| hypothetical protein SORBIDRAFT_10g028830 [S...    64   1e-08
ref|NP_001141733.1| uncharacterized protein LOC100273864 [Zea ma...    64   1e-08
gb|ACF86952.1| unknown [Zea mays]                                      64   1e-08
ref|NP_001105558.1| ribosomal protein L2 [Zea mays] gi|17644110|...    64   1e-08

>ref|XP_002444624.1| hypothetical protein SORBIDRAFT_07g024980 [Sorghum bicolor]
           gi|241940974|gb|EES14119.1| hypothetical protein
           SORBIDRAFT_07g024980 [Sorghum bicolor]
          Length = 450

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   WLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 141
           WLG RP VRGVAMNPVDHPH               PWGKPTK GYRS
Sbjct: 396 WLGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 442


>ref|XP_002438950.1| hypothetical protein SORBIDRAFT_10g028830 [Sorghum bicolor]
           gi|241917173|gb|EER90317.1| hypothetical protein
           SORBIDRAFT_10g028830 [Sorghum bicolor]
          Length = 434

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   WLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 141
           WLG RP VRGVAMNPVDHPH               PWGKPTK GYRS
Sbjct: 379 WLGRRPVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 425


>ref|NP_001141733.1| uncharacterized protein LOC100273864 [Zea mays]
           gi|195607472|gb|ACG25566.1| hypothetical protein [Zea
           mays]
          Length = 448

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   WLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 141
           WLG RP VRGVAMNPVDHPH               PWGKPTK GYRS
Sbjct: 383 WLGRRPVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 429


>gb|ACF86952.1| unknown [Zea mays]
          Length = 125

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   WLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 141
           WLG RP VRGVAMNPVDHPH               PWGKPTK GYRS
Sbjct: 60  WLGRRPVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 106


>ref|NP_001105558.1| ribosomal protein L2 [Zea mays] gi|17644110|gb|AAK95389.1|
           ribosomal protein L2 [Zea mays]
           gi|219887369|gb|ACL54059.1| unknown [Zea mays]
           gi|413922436|gb|AFW62368.1| Ribosomal protein L2 [Zea
           mays]
          Length = 448

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   WLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 141
           WLG RP VRGVAMNPVDHPH               PWGKPTK GYRS
Sbjct: 383 WLGRRPVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 429


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