BLASTX nr result
ID: Coptis25_contig00018543
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018543 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29088.3| unnamed protein product [Vitis vinifera] 65 4e-10 ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262... 65 4e-10 emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera] 65 4e-10 ref|XP_003577185.1| PREDICTED: uncharacterized protein LOC100832... 62 5e-09 ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|2... 60 9e-09 >emb|CBI29088.3| unnamed protein product [Vitis vinifera] Length = 1124 Score = 65.5 bits (158), Expect(2) = 4e-10 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%) Frame = +3 Query: 15 CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185 C S +N + FPF I G Q+V S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I Sbjct: 1039 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 1096 Score = 23.5 bits (49), Expect(2) = 4e-10 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +1 Query: 1 ALCVGVILHG 30 ALCVGVI HG Sbjct: 1028 ALCVGVIFHG 1037 >ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262596 [Vitis vinifera] Length = 417 Score = 65.5 bits (158), Expect(2) = 4e-10 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%) Frame = +3 Query: 15 CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185 C S +N + FPF I G Q+V S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I Sbjct: 311 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 368 Score = 23.5 bits (49), Expect(2) = 4e-10 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +1 Query: 1 ALCVGVILHG 30 ALCVGVI HG Sbjct: 300 ALCVGVIFHG 309 >emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera] Length = 239 Score = 65.5 bits (158), Expect(2) = 4e-10 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%) Frame = +3 Query: 15 CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185 C S +N + FPF I G Q+V S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I Sbjct: 137 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 194 Score = 23.5 bits (49), Expect(2) = 4e-10 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +1 Query: 1 ALCVGVILHG 30 ALCVGVI HG Sbjct: 126 ALCVGVIFHG 135 >ref|XP_003577185.1| PREDICTED: uncharacterized protein LOC100832898 [Brachypodium distachyon] Length = 1098 Score = 61.6 bits (148), Expect(2) = 5e-09 Identities = 27/49 (55%), Positives = 37/49 (75%) Frame = +3 Query: 42 ISFPFLHIQGQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVIC 188 ISF F +G +VGLS +Y+L G+Y ++S +ALAPYRA YA+A +G IC Sbjct: 1024 ISFKFPGRRGHEVGLSFLYLLGGYYSFVSSMALAPYRALYAIAIIGFIC 1072 Score = 23.5 bits (49), Expect(2) = 5e-09 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +1 Query: 4 LCVGVILHG 30 LCVGVILHG Sbjct: 1005 LCVGVILHG 1013 >ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|222847333|gb|EEE84880.1| predicted protein [Populus trichocarpa] Length = 834 Score = 59.7 bits (143), Expect(2) = 9e-09 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = +3 Query: 48 FPFLHIQGQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185 F F I G++V L +Y+LAG+Y Y++GL L PYR FYAMAA+G I Sbjct: 761 FSFPEIFGKEVRLDFIYLLAGYYSYVAGLGLVPYRVFYAMAAIGFI 806 Score = 24.6 bits (52), Expect(2) = 9e-09 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 1 ALCVGVILHG 30 ALC+GVILHG Sbjct: 740 ALCIGVILHG 749