BLASTX nr result

ID: Coptis25_contig00018543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018543
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29088.3| unnamed protein product [Vitis vinifera]               65   4e-10
ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262...    65   4e-10
emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]    65   4e-10
ref|XP_003577185.1| PREDICTED: uncharacterized protein LOC100832...    62   5e-09
ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|2...    60   9e-09

>emb|CBI29088.3| unnamed protein product [Vitis vinifera]
          Length = 1124

 Score = 65.5 bits (158), Expect(2) = 4e-10
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 15   CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185
            C S   +N + FPF  I G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I
Sbjct: 1039 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 1096



 Score = 23.5 bits (49), Expect(2) = 4e-10
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1    ALCVGVILHG 30
            ALCVGVI HG
Sbjct: 1028 ALCVGVIFHG 1037


>ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262596 [Vitis vinifera]
          Length = 417

 Score = 65.5 bits (158), Expect(2) = 4e-10
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 15  CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185
           C S   +N + FPF  I G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I
Sbjct: 311 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 368



 Score = 23.5 bits (49), Expect(2) = 4e-10
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1   ALCVGVILHG 30
           ALCVGVI HG
Sbjct: 300 ALCVGVIFHG 309


>emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]
          Length = 239

 Score = 65.5 bits (158), Expect(2) = 4e-10
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 15  CHSPWSYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185
           C S   +N + FPF  I G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+I
Sbjct: 137 CDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLI 194



 Score = 23.5 bits (49), Expect(2) = 4e-10
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1   ALCVGVILHG 30
           ALCVGVI HG
Sbjct: 126 ALCVGVIFHG 135


>ref|XP_003577185.1| PREDICTED: uncharacterized protein LOC100832898 [Brachypodium
            distachyon]
          Length = 1098

 Score = 61.6 bits (148), Expect(2) = 5e-09
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = +3

Query: 42   ISFPFLHIQGQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVIC 188
            ISF F   +G +VGLS +Y+L G+Y ++S +ALAPYRA YA+A +G IC
Sbjct: 1024 ISFKFPGRRGHEVGLSFLYLLGGYYSFVSSMALAPYRALYAIAIIGFIC 1072



 Score = 23.5 bits (49), Expect(2) = 5e-09
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 4    LCVGVILHG 30
            LCVGVILHG
Sbjct: 1005 LCVGVILHG 1013


>ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|222847333|gb|EEE84880.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score = 59.7 bits (143), Expect(2) = 9e-09
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 48  FPFLHIQGQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVI 185
           F F  I G++V L  +Y+LAG+Y Y++GL L PYR FYAMAA+G I
Sbjct: 761 FSFPEIFGKEVRLDFIYLLAGYYSYVAGLGLVPYRVFYAMAAIGFI 806



 Score = 24.6 bits (52), Expect(2) = 9e-09
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   ALCVGVILHG 30
           ALC+GVILHG
Sbjct: 740 ALCIGVILHG 749


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