BLASTX nr result

ID: Coptis25_contig00018542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018542
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262...   112   2e-23
emb|CBI29088.3| unnamed protein product [Vitis vinifera]              112   2e-23
emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]   112   2e-23
ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002526926.1| conserved hypothetical protein [Ricinus comm...   102   4e-20

>ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262596 [Vitis vinifera]
          Length = 417

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   FPWFLDSALCVGVILHGLCGSKPEYNFISFPFLHIQG-QQVGLSIVYMFAGFSCYLSGLA 179
           FPW LDSALCVGVI HG+C SKPE+N + FPF  I G Q+V  S +Y+FAG   YLSGLA
Sbjct: 293 FPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLA 352

Query: 180 LAPYRAFYAMAAVGVISAVLRILE 251
           LAPYR FYAMAA+G+IS   +I+E
Sbjct: 353 LAPYRVFYAMAAIGLISFTFKIIE 376


>emb|CBI29088.3| unnamed protein product [Vitis vinifera]
          Length = 1124

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3    FPWFLDSALCVGVILHGLCGSKPEYNFISFPFLHIQG-QQVGLSIVYMFAGFSCYLSGLA 179
            FPW LDSALCVGVI HG+C SKPE+N + FPF  I G Q+V  S +Y+FAG   YLSGLA
Sbjct: 1021 FPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLA 1080

Query: 180  LAPYRAFYAMAAVGVISAVLRILE 251
            LAPYR FYAMAA+G+IS   +I+E
Sbjct: 1081 LAPYRVFYAMAAIGLISFTFKIIE 1104


>emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]
          Length = 239

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   FPWFLDSALCVGVILHGLCGSKPEYNFISFPFLHIQG-QQVGLSIVYMFAGFSCYLSGLA 179
           FPW LDSALCVGVI HG+C SKPE+N + FPF  I G Q+V  S +Y+FAG   YLSGLA
Sbjct: 119 FPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLA 178

Query: 180 LAPYRAFYAMAAVGVISAVLRILE 251
           LAPYR FYAMAA+G+IS   +I+E
Sbjct: 179 LAPYRVFYAMAAIGLISFTFKIIE 202


>ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|222847333|gb|EEE84880.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = +3

Query: 3   FPWFLDSALCVGVILHGLCGSKPEYNFISFPFLHIQGQQVGLSIVYMFAGFSCYLSGLAL 182
           FPWFLDSALC+GVILHG+  SKPE+N + F F  I G++V L  +Y+ AG+  Y++GL L
Sbjct: 733 FPWFLDSALCIGVILHGILNSKPEFNSM-FSFPEIFGKEVRLDFIYLLAGYYSYVAGLGL 791

Query: 183 APYRAFYAMAAVGVISAVLRIL 248
            PYR FYAMAA+G IS V+RIL
Sbjct: 792 VPYRVFYAMAAIGFISCVMRIL 813


>ref|XP_002526926.1| conserved hypothetical protein [Ricinus communis]
            gi|223533678|gb|EEF35413.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1110

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/82 (62%), Positives = 59/82 (71%)
 Frame = +3

Query: 3    FPWFLDSALCVGVILHGLCGSKPEYNFISFPFLHIQGQQVGLSIVYMFAGFSCYLSGLAL 182
            FPWFLDSALC+GVILHG+  +KPE N   F    IQG+++ L  VY+ AG+  YL GL L
Sbjct: 1011 FPWFLDSALCIGVILHGILNTKPECNS-QFSLSVIQGRELRLDFVYLLAGYYSYLYGLGL 1069

Query: 183  APYRAFYAMAAVGVISAVLRIL 248
             PYR FYAMAAVG IS  LRIL
Sbjct: 1070 EPYRVFYAMAAVGFISLALRIL 1091


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