BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018540
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   119   2e-25
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   117   7e-25
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   117   1e-24
ref|XP_002884951.1| NOL1/NOP2/sun family protein [Arabidopsis ly...   114   6e-24

>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +1

Query: 1   ALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGI 180
           +LCHDE+AFRSMEPLLLQILRIGFYEI+KLDMP YAVVDENV LAKV+LRPGAGNMVNGI
Sbjct: 136 SLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAKVSLRPGAGNMVNGI 195

Query: 181 LRRLVFLK 204
           LR+LV LK
Sbjct: 196 LRKLVLLK 203


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = +1

Query: 1   ALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGI 180
           +LCHD + FRSMEPLLLQILRIGFYEI+ LDMPPYAVVDENV LAKVALRPGAGNMVN I
Sbjct: 134 SLCHDSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAGNMVNAI 193

Query: 181 LRRLVFLK 204
           LR+LV LK
Sbjct: 194 LRKLVLLK 201


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/68 (86%), Positives = 62/68 (91%)
 Frame = +1

Query: 1   ALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGI 180
           +L HDE  FRSMEPLLLQILRIG YEI+KLDMPPYAVVDENV LAKVALRPGAGNMVNGI
Sbjct: 136 SLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPPYAVVDENVRLAKVALRPGAGNMVNGI 195

Query: 181 LRRLVFLK 204
           LR+LV LK
Sbjct: 196 LRKLVLLK 203


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/68 (83%), Positives = 61/68 (89%)
 Frame = +1

Query: 1   ALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGI 180
           +LCHD + FRSMEPLLLQILRIGFYEI+ LDMPPYAVVDENV LAKVALRPGA NMVN I
Sbjct: 134 SLCHDSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAANMVNAI 193

Query: 181 LRRLVFLK 204
           LR+LV LK
Sbjct: 194 LRKLVLLK 201


>ref|XP_002884951.1| NOL1/NOP2/sun family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330791|gb|EFH61210.1| NOL1/NOP2/sun family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = +1

Query: 1   ALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGI 180
           +LCH+ER FR+MEPLLLQILRIG YEI+K DMPPYAVVDENV LAKVALRPGAG+ VNGI
Sbjct: 134 SLCHNERTFRNMEPLLLQILRIGVYEIIKRDMPPYAVVDENVRLAKVALRPGAGDFVNGI 193

Query: 181 LRRLVFLK 204
           LR+LV LK
Sbjct: 194 LRKLVSLK 201