BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018536
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]   114   9e-24
emb|CBI26220.3| unnamed protein product [Vitis vinifera]              113   3e-23
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]           113   3e-23
ref|XP_002311610.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]      96   4e-18

>emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]
          Length = 443

 Score =  114 bits (286), Expect = 9e-24
 Identities = 62/102 (60%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
 Frame = +3

Query: 273 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 449
           P+ K+RKFSAS+WE+   +YQ+    +NAPST NS   AP R +      T  KRD   L
Sbjct: 66  PSLKRRKFSASAWEDTGRHYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125

Query: 450 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 572
            DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN
Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167


>emb|CBI26220.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 273 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 449
           P+ K+RKFSAS+WE+    YQ+    +NAPST NS   AP R +      T  KRD   L
Sbjct: 66  PSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125

Query: 450 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 572
            DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN
Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score =  113 bits (282), Expect = 3e-23
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 273 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCL-TGAKRDLEIL 449
           P+ K+RKFSAS+WE+    YQ+    +NAPST NS   AP R +      T  KRD   L
Sbjct: 66  PSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTCNSLVPAPTRPNANAYTSTSCKRDRSKL 125

Query: 450 -DDDIVFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 572
            DDD+VFMSR EIER SPSRKDGID+LRE +LRYSYCAFLQN
Sbjct: 126 EDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQN 167


>ref|XP_002311610.1| predicted protein [Populus trichocarpa] gi|222851430|gb|EEE88977.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = +3

Query: 273 PTSKKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCLT-GAKRDLEIL 449
           P  K+RKFSA +W +G  +Y +Y+  E A  + N+    P R++ ++  +   KRD   L
Sbjct: 74  PAFKRRKFSADTWGDGGRHYPQYNAYEYADLSYNNSVPLPTRSNDEVSTSISCKRDCSKL 133

Query: 450 DDDI-VFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 572
           ++D  VF+S+ EIER SPSRKDGID+LRET+LRYSYCAFLQN
Sbjct: 134 EEDEPVFLSKDEIERHSPSRKDGIDALRETHLRYSYCAFLQN 175


>ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = +3

Query: 282 KKRKFSASSWENGRGYYQEYHRRENAPSTSNSFYSAPIRADQKLCLTGA-KRDLEILDDD 458
           K+RKFSAS WE+   Y+ +    +N PS  ++    P R++  +  + + KRD  I++DD
Sbjct: 84  KRRKFSASRWEDSGRYHWQGRTYDNGPSIYSNLVHPPPRSNNDVSTSASCKRDRRIMEDD 143

Query: 459 I-VFMSRIEIERLSPSRKDGIDSLRETYLRYSYCAFLQN 572
              FMSR EIER SPSRKDGID++RET+LRY+YCAFLQ+
Sbjct: 144 EPFFMSRDEIERCSPSRKDGIDTIRETHLRYTYCAFLQS 182