BLASTX nr result

ID: Coptis25_contig00018524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018524
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37604.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002276832.1| PREDICTED: probable plastid-lipid-associated...    65   6e-09
emb|CAN60269.1| hypothetical protein VITISV_029394 [Vitis vinifera]    65   6e-09
ref|XP_002300202.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|NP_001031862.1| putative plastid-lipid-associated protein 7 ...    54   4e-06

>emb|CBI37604.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
 Frame = +3

Query: 3   GIN--IFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKV 116
           GIN  +FGVPSAKKSEIE LVKLLESQNPTP PT NLDKV
Sbjct: 83  GINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKV 122


>ref|XP_002276832.1| PREDICTED: probable plastid-lipid-associated protein 7,
           chloroplastic [Vitis vinifera]
          Length = 285

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
 Frame = +3

Query: 3   GIN--IFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKV 116
           GIN  +FGVPSAKKSEIE LVKLLESQNPTP PT NLDKV
Sbjct: 108 GINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKV 147


>emb|CAN60269.1| hypothetical protein VITISV_029394 [Vitis vinifera]
          Length = 233

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
 Frame = +3

Query: 3   GIN--IFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKV 116
           GIN  +FGVPSAKKSEIE LVKLLESQNPTP PT NLDKV
Sbjct: 104 GINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKV 143


>ref|XP_002300202.1| predicted protein [Populus trichocarpa] gi|222847460|gb|EEE85007.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 12  IFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKV 116
           IFGVPSAKKS I  LV+LLESQNPTP PT NL+KV
Sbjct: 51  IFGVPSAKKSAILGLVELLESQNPTPDPTLNLEKV 85


>ref|NP_001031862.1| putative plastid-lipid-associated protein 7 [Arabidopsis thaliana]
           gi|75102996|sp|Q5M755.1|PAP7_ARATH RecName:
           Full=Probable plastid-lipid-associated protein 7,
           chloroplastic; AltName: Full=Fibrillin-7; Flags:
           Precursor gi|56461766|gb|AAV91339.1| At5g09820
           [Arabidopsis thaliana] gi|110737316|dbj|BAF00604.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332004069|gb|AED91452.1| putative
           plastid-lipid-associated protein 7 [Arabidopsis
           thaliana]
          Length = 273

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
 Frame = +3

Query: 3   GIN--IFGVPSAKKSEIEDLVKLLESQNPTPHPTENLDKV 116
           GIN  IFGV S KK+EIE LVKLLE +NPTP PT  LDK+
Sbjct: 96  GINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKI 135



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 181 KVGGCWK 201
           K+GGCWK
Sbjct: 134 KIGGCWK 140


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