BLASTX nr result

ID: Coptis25_contig00018520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018520
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX55239.1| catalytic/ oxidoreductase [Allium sativum]             126   3e-27
ref|XP_004157459.1| PREDICTED: LYR motif-containing protein 4-li...   123   2e-26
ref|XP_002284477.1| PREDICTED: LYR motif-containing protein 4 is...   123   2e-26
ref|XP_002514695.1| Protein C6orf149, putative [Ricinus communis...   119   3e-25
gb|AFG45818.1| Pinus taeda anonymous locus 0_14360_01 genomic se...   118   6e-25

>gb|AEX55239.1| catalytic/ oxidoreductase [Allium sativum]
          Length = 92

 Score =  126 bits (316), Expect = 3e-27
 Identities = 59/88 (67%), Positives = 74/88 (84%)
 Frame = +3

Query: 216 MSTPSRAEILTLFRALLRTPKKFPDYNIREYAKRRTIDGFHENRKLSDPSLLSSAFNDAK 395
           MSTPS+ ++L L+R+LL+T  KFPDYNIREY +RR ID F  N+ LSD SL+SS F+D K
Sbjct: 1   MSTPSKPQVLALYRSLLKTAAKFPDYNIREYTRRRAIDSFRSNQHLSDSSLISSVFSDGK 60

Query: 396 SQLEVVKRQAIVYSLYAPKVKSIMEIQS 479
           SQLE+ KRQA+VYSLYAP+VKSIMEI++
Sbjct: 61  SQLEIAKRQAVVYSLYAPEVKSIMEIKT 88


>ref|XP_004157459.1| PREDICTED: LYR motif-containing protein 4-like [Cucumis sativus]
          Length = 88

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/86 (69%), Positives = 73/86 (84%)
 Frame = +3

Query: 216 MSTPSRAEILTLFRALLRTPKKFPDYNIREYAKRRTIDGFHENRKLSDPSLLSSAFNDAK 395
           M+TPS +EIL+LFR+LLRT ++FPDYNIREY KRRTID F EN+ LSD S +SS +   +
Sbjct: 1   MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGR 60

Query: 396 SQLEVVKRQAIVYSLYAPKVKSIMEI 473
           +QLEV KRQAIVYSLYAPKVKSIM++
Sbjct: 61  AQLEVAKRQAIVYSLYAPKVKSIMDV 86


>ref|XP_002284477.1| PREDICTED: LYR motif-containing protein 4 isoform 1 [Vitis
           vinifera] gi|359491670|ref|XP_003634301.1| PREDICTED:
           LYR motif-containing protein 4 [Vitis vinifera]
          Length = 90

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/86 (65%), Positives = 75/86 (87%)
 Frame = +3

Query: 219 STPSRAEILTLFRALLRTPKKFPDYNIREYAKRRTIDGFHENRKLSDPSLLSSAFNDAKS 398
           STPS+++IL+LFR+LLRT + F DYNIREY KRRTIDGF  NR +SDPS +++A++DA+S
Sbjct: 3   STPSKSQILSLFRSLLRTARDFSDYNIREYTKRRTIDGFRHNRHVSDPSSIAAAYSDAES 62

Query: 399 QLEVVKRQAIVYSLYAPKVKSIMEIQ 476
           QL++ +RQ IVYSLY PK+KS+MEI+
Sbjct: 63  QLQIARRQVIVYSLYVPKLKSVMEIK 88


>ref|XP_002514695.1| Protein C6orf149, putative [Ricinus communis]
           gi|223546299|gb|EEF47801.1| Protein C6orf149, putative
           [Ricinus communis]
          Length = 92

 Score =  119 bits (299), Expect = 3e-25
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +3

Query: 228 SRAEILTLFRALLRTPKKFPDYNIREYAKRRTIDGFHENRKLSDPSLLSSAFNDAKSQLE 407
           S+ EIL+L R+LLRT ++F DYNIREY KRRTID F ENR L+DPS +S+AF+D K+QL+
Sbjct: 3   SKGEILSLCRSLLRTARQFSDYNIREYTKRRTIDAFRENRNLTDPSSISAAFSDGKAQLD 62

Query: 408 VVKRQAIVYSLYAPKVKSIMEIQS 479
           V KRQ +VYSLYAPK+KS+ME +S
Sbjct: 63  VAKRQVVVYSLYAPKIKSVMETKS 86


>gb|AFG45818.1| Pinus taeda anonymous locus 0_14360_01 genomic sequence
           gi|383130219|gb|AFG45819.1| Pinus taeda anonymous locus
           0_14360_01 genomic sequence
          Length = 96

 Score =  118 bits (296), Expect = 6e-25
 Identities = 54/83 (65%), Positives = 71/83 (85%)
 Frame = +3

Query: 225 PSRAEILTLFRALLRTPKKFPDYNIREYAKRRTIDGFHENRKLSDPSLLSSAFNDAKSQL 404
           PS +++ +LFR+LLRT ++FPDYNIREY KRRTI+GF +N++L+DP+ + SAF + KSQL
Sbjct: 9   PSTSQVRSLFRSLLRTARRFPDYNIREYVKRRTIEGFRQNQQLTDPAAVVSAFTEGKSQL 68

Query: 405 EVVKRQAIVYSLYAPKVKSIMEI 473
           EV  RQA+VYSLY PKVKSIM+I
Sbjct: 69  EVASRQAVVYSLYVPKVKSIMDI 91


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