BLASTX nr result
ID: Coptis25_contig00018518
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018518 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABF99442.1| Elongation factor P family protein, expressed [Or... 119 3e-25 gb|AAP21425.1| putative translation elongation factor P [Oryza s... 119 3e-25 tpg|DAA52029.1| TPA: elongation factor P [Zea mays] 116 2e-24 gb|ACG41065.1| elongation factor P [Zea mays] 116 2e-24 ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|... 116 2e-24 >gb|ABF99442.1| Elongation factor P family protein, expressed [Oryza sativa Japonica Group] gi|125546120|gb|EAY92259.1| hypothetical protein OsI_13980 [Oryza sativa Indica Group] gi|125588319|gb|EAZ28983.1| hypothetical protein OsJ_13028 [Oryza sativa Japonica Group] Length = 262 Score = 119 bits (297), Expect = 3e-25 Identities = 51/78 (65%), Positives = 70/78 (89%) Frame = +1 Query: 1 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180 ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA PQYK+VLL+NGLTV+ PPF+ Sbjct: 184 DEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFV 243 Query: 181 EAGDQIVINTLEDTYMER 234 EAG++IV++T +D+YM R Sbjct: 244 EAGEKIVVSTADDSYMTR 261 >gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica Group] Length = 247 Score = 119 bits (297), Expect = 3e-25 Identities = 51/78 (65%), Positives = 70/78 (89%) Frame = +1 Query: 1 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180 ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA PQYK+VLL+NGLTV+ PPF+ Sbjct: 169 DEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFV 228 Query: 181 EAGDQIVINTLEDTYMER 234 EAG++IV++T +D+YM R Sbjct: 229 EAGEKIVVSTADDSYMTR 246 >tpg|DAA52029.1| TPA: elongation factor P [Zea mays] Length = 103 Score = 116 bits (290), Expect = 2e-24 Identities = 52/78 (66%), Positives = 69/78 (88%) Frame = +1 Query: 1 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180 ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI Sbjct: 25 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 84 Query: 181 EAGDQIVINTLEDTYMER 234 EAG+ IVI+T +D+YM R Sbjct: 85 EAGENIVISTADDSYMTR 102 >gb|ACG41065.1| elongation factor P [Zea mays] Length = 246 Score = 116 bits (290), Expect = 2e-24 Identities = 52/78 (66%), Positives = 69/78 (88%) Frame = +1 Query: 1 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180 ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227 Query: 181 EAGDQIVINTLEDTYMER 234 EAG+ IVI+T +D+YM R Sbjct: 228 EAGENIVISTADDSYMTR 245 >ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1| elongation factor P [Zea mays] Length = 246 Score = 116 bits (290), Expect = 2e-24 Identities = 52/78 (66%), Positives = 69/78 (88%) Frame = +1 Query: 1 EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180 ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227 Query: 181 EAGDQIVINTLEDTYMER 234 EAG+ IVI+T +D+YM R Sbjct: 228 EAGENIVISTADDSYMTR 245