BLASTX nr result

ID: Coptis25_contig00018518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018518
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF99442.1| Elongation factor P family protein, expressed [Or...   119   3e-25
gb|AAP21425.1| putative translation elongation factor P [Oryza s...   119   3e-25
tpg|DAA52029.1| TPA: elongation factor P [Zea mays]                   116   2e-24
gb|ACG41065.1| elongation factor P [Zea mays]                         116   2e-24
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   116   2e-24

>gb|ABF99442.1| Elongation factor P family protein, expressed [Oryza sativa
           Japonica Group] gi|125546120|gb|EAY92259.1| hypothetical
           protein OsI_13980 [Oryza sativa Indica Group]
           gi|125588319|gb|EAZ28983.1| hypothetical protein
           OsJ_13028 [Oryza sativa Japonica Group]
          Length = 262

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/78 (65%), Positives = 70/78 (89%)
 Frame = +1

Query: 1   EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180
           ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA PQYK+VLL+NGLTV+ PPF+
Sbjct: 184 DEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFV 243

Query: 181 EAGDQIVINTLEDTYMER 234
           EAG++IV++T +D+YM R
Sbjct: 244 EAGEKIVVSTADDSYMTR 261


>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/78 (65%), Positives = 70/78 (89%)
 Frame = +1

Query: 1   EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180
           ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA PQYK+VLL+NGLTV+ PPF+
Sbjct: 169 DEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFV 228

Query: 181 EAGDQIVINTLEDTYMER 234
           EAG++IV++T +D+YM R
Sbjct: 229 EAGEKIVVSTADDSYMTR 246


>tpg|DAA52029.1| TPA: elongation factor P [Zea mays]
          Length = 103

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/78 (66%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI
Sbjct: 25  DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 84

Query: 181 EAGDQIVINTLEDTYMER 234
           EAG+ IVI+T +D+YM R
Sbjct: 85  EAGENIVISTADDSYMTR 102


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/78 (66%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI
Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227

Query: 181 EAGDQIVINTLEDTYMER 234
           EAG+ IVI+T +D+YM R
Sbjct: 228 EAGENIVISTADDSYMTR 245


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/78 (66%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   EDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFI 180
           ++MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFI
Sbjct: 168 DEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFI 227

Query: 181 EAGDQIVINTLEDTYMER 234
           EAG+ IVI+T +D+YM R
Sbjct: 228 EAGENIVISTADDSYMTR 245


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