BLASTX nr result

ID: Coptis25_contig00018509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018509
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33109.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002278144.1| PREDICTED: uncharacterized protein LOC100257...    61   1e-07
emb|CBI33114.3| unnamed protein product [Vitis vinifera]               55   5e-06

>emb|CBI33109.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = +1

Query: 124 MAQVVNLRPTLN-YSSLSATRPINSSRGFCP-VRNPEWKNLQLKLNCKGRYTCLFSNNRK 297
           MAQ++ LRP +  + S  +TR  ++    CP   NP+W  LQ KL C GR++CLFSNNRK
Sbjct: 18  MAQLLTLRPPITAFRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRK 77

Query: 298 GEEQARNA 321
            +E+AR A
Sbjct: 78  -QEEARKA 84


>ref|XP_002278144.1| PREDICTED: uncharacterized protein LOC100257020 [Vitis vinifera]
          Length = 208

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = +1

Query: 124 MAQVVNLRPTLN-YSSLSATRPINSSRGFCP-VRNPEWKNLQLKLNCKGRYTCLFSNNRK 297
           MAQ++ LRP +  + S  +TR  ++    CP   NP+W  LQ KL C GR++CLFSNNRK
Sbjct: 1   MAQLLTLRPPITAFRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRK 60

Query: 298 GEEQARNA 321
            +E+AR A
Sbjct: 61  -QEEARKA 67


>emb|CBI33114.3| unnamed protein product [Vitis vinifera]
          Length = 123

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = +1

Query: 124 MAQVVNLRPTLN-YSSLSATRPINSSRGFCP-VRNPEWKNLQLKLNCKGRYTCLFSNNRK 297
           MAQ++ LRP +    S  +TR  ++    CP   NP+W  LQ KL C GR++CLFSNNRK
Sbjct: 12  MAQLLTLRPPITAVRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRK 71


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