BLASTX nr result

ID: Coptis25_contig00018498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018498
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...    63   3e-08
emb|CBI16521.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra...    60   2e-07
ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent tra...    58   7e-07
ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent tra...    58   7e-07

>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/67 (49%), Positives = 37/67 (55%)
 Frame = -3

Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23
           V+NCSSCRVA+KGL ALEV LQ             KQ               V+CFAAS+
Sbjct: 453 VVNCSSCRVAIKGLNALEVVLQVISVASIGIVAATKQSLMSVAARTALVSMAVICFAASR 512

Query: 22  WLSHFIY 2
           WLSHFIY
Sbjct: 513 WLSHFIY 519


>emb|CBI16521.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/67 (49%), Positives = 37/67 (55%)
 Frame = -3

Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23
           V+NCSSCRVA+KGL ALEV LQ             KQ               V+CFAAS+
Sbjct: 322 VVNCSSCRVAIKGLNALEVVLQVISVASIGIVAATKQSLMSVAARTALVSMAVICFAASR 381

Query: 22  WLSHFIY 2
           WLSHFIY
Sbjct: 382 WLSHFIY 388


>ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/67 (46%), Positives = 36/67 (53%)
 Frame = -3

Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23
           V+NCSSC+VA KGL ALEV LQ             KQ               +LCFA+S+
Sbjct: 459 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSLVSGAARVLMVAMAILCFASSR 518

Query: 22  WLSHFIY 2
           WLSHFIY
Sbjct: 519 WLSHFIY 525


>ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = -3

Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23
           V+NCSSC+VA KGL ALEV LQ             KQ               + CFA+S+
Sbjct: 459 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSFVSGAARVLMLVMAIFCFASSR 518

Query: 22  WLSHFIY 2
           WLSHFIY
Sbjct: 519 WLSHFIY 525


>ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 544

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = -3

Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23
           V+NCSSC+VA KGL ALEV LQ             KQ               + CFA+S+
Sbjct: 465 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSFVSGAARVLMLVMAIFCFASSR 524

Query: 22  WLSHFIY 2
           WLSHFIY
Sbjct: 525 WLSHFIY 531


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