BLASTX nr result
ID: Coptis25_contig00018498
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018498 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra... 63 3e-08 emb|CBI16521.3| unnamed protein product [Vitis vinifera] 63 3e-08 ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra... 60 2e-07 ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent tra... 58 7e-07 ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent tra... 58 7e-07 >ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Vitis vinifera] Length = 532 Score = 62.8 bits (151), Expect = 3e-08 Identities = 33/67 (49%), Positives = 37/67 (55%) Frame = -3 Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23 V+NCSSCRVA+KGL ALEV LQ KQ V+CFAAS+ Sbjct: 453 VVNCSSCRVAIKGLNALEVVLQVISVASIGIVAATKQSLMSVAARTALVSMAVICFAASR 512 Query: 22 WLSHFIY 2 WLSHFIY Sbjct: 513 WLSHFIY 519 >emb|CBI16521.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 62.8 bits (151), Expect = 3e-08 Identities = 33/67 (49%), Positives = 37/67 (55%) Frame = -3 Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23 V+NCSSCRVA+KGL ALEV LQ KQ V+CFAAS+ Sbjct: 322 VVNCSSCRVAIKGLNALEVVLQVISVASIGIVAATKQSLMSVAARTALVSMAVICFAASR 381 Query: 22 WLSHFIY 2 WLSHFIY Sbjct: 382 WLSHFIY 388 >ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus] Length = 538 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/67 (46%), Positives = 36/67 (53%) Frame = -3 Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23 V+NCSSC+VA KGL ALEV LQ KQ +LCFA+S+ Sbjct: 459 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSLVSGAARVLMVAMAILCFASSR 518 Query: 22 WLSHFIY 2 WLSHFIY Sbjct: 519 WLSHFIY 525 >ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus] Length = 538 Score = 58.2 bits (139), Expect = 7e-07 Identities = 30/67 (44%), Positives = 35/67 (52%) Frame = -3 Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23 V+NCSSC+VA KGL ALEV LQ KQ + CFA+S+ Sbjct: 459 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSFVSGAARVLMLVMAIFCFASSR 518 Query: 22 WLSHFIY 2 WLSHFIY Sbjct: 519 WLSHFIY 525 >ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus] Length = 544 Score = 58.2 bits (139), Expect = 7e-07 Identities = 30/67 (44%), Positives = 35/67 (52%) Frame = -3 Query: 202 VLNCSSCRVAVKGLKALEVALQXXXXXXXXXXXXIKQGXXXXXXXXXXXXXXVLCFAASK 23 V+NCSSC+VA KGL ALEV LQ KQ + CFA+S+ Sbjct: 465 VVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSFVSGAARVLMLVMAIFCFASSR 524 Query: 22 WLSHFIY 2 WLSHFIY Sbjct: 525 WLSHFIY 531