BLASTX nr result

ID: Coptis25_contig00018497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018497
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522190.1| PREDICTED: uncharacterized protein LOC100795...    67   5e-09
gb|AFW77346.1| hypothetical protein ZEAMMB73_150303 [Zea mays]         61   3e-07
gb|AFW70500.1| hypothetical protein ZEAMMB73_226947 [Zea mays]         61   3e-07
gb|AFW70499.1| hypothetical protein ZEAMMB73_226947 [Zea mays]         61   3e-07
gb|AFW67904.1| hypothetical protein ZEAMMB73_395092 [Zea mays]         61   4e-07

>ref|XP_003522190.1| PREDICTED: uncharacterized protein LOC100795315 [Glycine max]
          Length = 374

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
 Frame = +3

Query: 153 MDSHYSTPSGSNSLDDSQLNEGMDDDAPISGSSAASKKRGPSIGIEEIEGQPRPKLI-MQ 329
           ++S   + S S+  + + LN     +A   GS      RGP++ + +I   P  K I +Q
Sbjct: 43  INSLNKSQSESHGTESNHLNNSASTNAE-QGSLKTRNVRGPTL-LRDIWTMPPGKTIDVQ 100

Query: 330 TNRKGQPVTPIENVTEFGTRLGYIARRD--IPICHSDWQNIDKELIKKVVSTLGRQFEFE 503
            NR+ Q +   +   +  + LG IAR     P+   DW+  DKE   K+V  + ++F   
Sbjct: 101 FNRRNQAIG--KEGRKLASFLGIIARNPELAPLNIDDWRCFDKEEKNKLVDLVRKKFSIP 158

Query: 504 YEKTIDTDYTWQKLNEAWRNYKHTLYED-FVQDEDPSLVKEVTPHNIPLED*HQFVDYCN 680
                  ++  + L + W++YK  L    F + +    + +  P++IP +     V Y  
Sbjct: 159 ER---GVEFVKKSLGKKWKDYKCDLRSMYFTKYKTKHTLLKHRPNHIPRDQWIGLVSYWV 215

Query: 681 TDKFKAMSERNKKNREQQIMPSCLGRTSVAIARNELA 791
           +DK K  S+ NK NR +Q MP   G  S+    NE A
Sbjct: 216 SDKGKRRSQANKSNRAKQKMPHTGGSKSIGTLMNEKA 252


>gb|AFW77346.1| hypothetical protein ZEAMMB73_150303 [Zea mays]
          Length = 1364

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
 Frame = +3

Query: 168 STPSGSNSLDDSQLNEGMDDDAPISGSSAASK---KRGPSIGIEEIEGQPRPKLIMQTNR 338
           ST   S S   S       +D    GS  +++   KRG +   +  +G PR    +  ++
Sbjct: 13  STSKTSGSTSTSSSTSLHSEDIVEKGSCTSARHRTKRGHAKCKKLEKGGPRR---LTFDK 69

Query: 339 KGQPVTPIENVTEFGTRLGYIARRDIPICHSDWQNIDKELIKKVVSTLGRQFEFEYEKTI 518
            G   +P+++V EF +  GYIAR  + I   DW+ +   +   +   + ++F    ++T 
Sbjct: 70  NGIAQSPVKHVNEFSSYCGYIARMRVDIRIKDWRKVPTVVKSNLWEDVSKKFVMPMDETH 129

Query: 519 DTD---YTWQKLNEAWRNYKHTLYEDFVQ------DEDPSLVKEVTPHNIPLED*HQFVD 671
             +      + ++ AW+++K  L  ++V+      ++ P L KE  P          FV+
Sbjct: 130 TLNVKKVALKSMSHAWKDFKWKLNINYVKKDKTPFEDYPELKKEWWP---------DFVE 180

Query: 672 YCNTDKFKAMSERNKKNREQQIMPSCLGRTSVAIARNELAL--------GKGIP 809
           +   D++ A+ E+ K+++        LGR S  + + + A+        GK IP
Sbjct: 181 WVTFDEYIALGEKGKQSQSMNKFRQKLGRRSYTVQKRKWAMEDAQALTEGKSIP 234


>gb|AFW70500.1| hypothetical protein ZEAMMB73_226947 [Zea mays]
          Length = 1104

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
 Frame = +3

Query: 168 STPSGSNSLDDSQLNEGMDDDAPISGSSAASK---KRGPSIGIEEIEGQPRPKLIMQTNR 338
           ST   S S   S       +D    GS  +++   KRG +   +  +G PR    +  ++
Sbjct: 13  STSKTSGSTSTSSSTSLHSEDIVEKGSCTSARHRTKRGHAKCKKLEKGGPRR---LTFDK 69

Query: 339 KGQPVTPIENVTEFGTRLGYIARRDIPICHSDWQNIDKELIKKVVSTLGRQFEFEYEKTI 518
            G   +PI++V EF +  GYIAR  + I   DW+ +   +   +   + ++F    ++T 
Sbjct: 70  NGIAQSPIKHVNEFSSYCGYIARMRVDIRIKDWRKVPTVVKSNLWEDVSKKFVMPRDETH 129

Query: 519 DTD---YTWQKLNEAWRNYKHTLYEDFVQ------DEDPSLVKEVTPHNIPLED*HQFVD 671
             +      + ++ AW+++K  L  ++V+      ++ P L KE  P          FV+
Sbjct: 130 TLNVKKVALKSMSHAWKDFKWKLNINYVKKDKTPFEDYPELKKEWWP---------DFVE 180

Query: 672 YCNTDKFKAMSERNKKNREQQIMPSCLGRTSVAIARNE--------LALGKGIP 809
           +  +D++ A+ E+ K+++        LGR S  + + +        L  GK IP
Sbjct: 181 WVTSDEYIALGEKGKQSQSMNKFRQKLGRRSYTVQKRKWAKEDAQALTEGKSIP 234


>gb|AFW70499.1| hypothetical protein ZEAMMB73_226947 [Zea mays]
          Length = 410

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
 Frame = +3

Query: 168 STPSGSNSLDDSQLNEGMDDDAPISGSSAASK---KRGPSIGIEEIEGQPRPKLIMQTNR 338
           ST   S S   S       +D    GS  +++   KRG +   +  +G PR    +  ++
Sbjct: 13  STSKTSGSTSTSSSTSLHSEDIVEKGSCTSARHRTKRGHAKCKKLEKGGPRR---LTFDK 69

Query: 339 KGQPVTPIENVTEFGTRLGYIARRDIPICHSDWQNIDKELIKKVVSTLGRQFEFEYEKTI 518
            G   +PI++V EF +  GYIAR  + I   DW+ +   +   +   + ++F    ++T 
Sbjct: 70  NGIAQSPIKHVNEFSSYCGYIARMRVDIRIKDWRKVPTVVKSNLWEDVSKKFVMPRDETH 129

Query: 519 DTD---YTWQKLNEAWRNYKHTLYEDFVQ------DEDPSLVKEVTPHNIPLED*HQFVD 671
             +      + ++ AW+++K  L  ++V+      ++ P L KE  P          FV+
Sbjct: 130 TLNVKKVALKSMSHAWKDFKWKLNINYVKKDKTPFEDYPELKKEWWP---------DFVE 180

Query: 672 YCNTDKFKAMSERNKKNREQQIMPSCLGRTSVAIARNE--------LALGKGIP 809
           +  +D++ A+ E+ K+++        LGR S  + + +        L  GK IP
Sbjct: 181 WVTSDEYIALGEKGKQSQSMNKFRQKLGRRSYTVQKRKWAKEDAQALTEGKSIP 234


>gb|AFW67904.1| hypothetical protein ZEAMMB73_395092 [Zea mays]
          Length = 1791

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
 Frame = +3

Query: 168  STPSGSNSLDDSQLNEGMDDDAPISGSSAASK---KRGPSIGIEEIEGQPRPKLIMQTNR 338
            ST   S S   S       +D    GS  +++   KRG +   +  +G PR    +  ++
Sbjct: 584  STSKTSGSTSTSSSTSLHSEDIVEKGSCTSARHRTKRGHAKCKKLEKGGPRR---LTFDK 640

Query: 339  KGQPVTPIENVTEFGTRLGYIARRDIPICHSDWQNIDKELIKKVVSTLGRQFEFEYEKTI 518
             G   +P+++V EF +  GYIAR  + I   DW+ +   +   +   + ++F    ++T 
Sbjct: 641  NGIAQSPVKHVNEFSSYCGYIARMRVDIRIKDWRKVPTVVKSNLWEDVSKKFVMPRDETH 700

Query: 519  DTD---YTWQKLNEAWRNYKHTLYEDFVQ------DEDPSLVKEVTPHNIPLED*HQFVD 671
              +      + ++ AW+++K  L  ++V+      ++ P L KE  P          FV+
Sbjct: 701  TLNVKKVALKSMSHAWKDFKWKLNINYVKKDKTPFEDYPELKKEWWP---------DFVE 751

Query: 672  YCNTDKFKAMSERNKKNREQQIMPSCLGRTSVAIARNE--------LALGKGIP 809
            +  +D++ A+ E+ K+++        LGR S  + + +        L  GK IP
Sbjct: 752  WVTSDEYIALGEKGKQSQSMNKFRQKLGRRSYTVQKRKWAKEDAQALTEGKSIP 805


Top