BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018494
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP...    73   2e-11
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]       72   5e-11
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...    71   8e-11
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...    70   1e-10
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...    70   1e-10

>ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
           sativus] gi|449498692|ref|XP_004160607.1| PREDICTED:
           polyadenylate-binding protein RBP47C-like [Cucumis
           sativus]
          Length = 426

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/86 (52%), Positives = 46/86 (53%)
 Frame = -1

Query: 258 DNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 79
           DNERSQAMTEMNG YCSSR MRIG ATPRK                              
Sbjct: 229 DNERSQAMTEMNGIYCSSRPMRIGAATPRK--SSGYQQQHSSQGGGYSTNGYFSQGLQSE 286

Query: 78  XXXXXXTIFVGGLDPSVTDEDLRQTF 1
                 TIFVGGLDP+VTDEDLRQ F
Sbjct: 287 GDSANTTIFVGGLDPNVTDEDLRQPF 312


>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/86 (51%), Positives = 46/86 (53%)
 Frame = -1

Query: 258 DNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 79
           DNERSQAMTEMNG YCSSR MRIG ATPRK                              
Sbjct: 262 DNERSQAMTEMNGVYCSSRPMRIGAATPRK----SSGYQQQYSSQGGYSNGGPAQGSQPD 317

Query: 78  XXXXXXTIFVGGLDPSVTDEDLRQTF 1
                 TIFVGGLDP+V+DEDLRQ F
Sbjct: 318 ADSTNTTIFVGGLDPNVSDEDLRQPF 343


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/86 (50%), Positives = 46/86 (53%)
 Frame = -1

Query: 258 DNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 79
           DNER+QAMTEMNG YCSSR MRIG ATPRK                              
Sbjct: 254 DNERTQAMTEMNGVYCSSRAMRIGAATPRK-------STGYQHQGGYVSNGASGQAFQAD 306

Query: 78  XXXXXXTIFVGGLDPSVTDEDLRQTF 1
                 TIFVGGLDP+VTDEDL+Q F
Sbjct: 307 GDSTNTTIFVGGLDPNVTDEDLKQPF 332


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
           sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
           polyadenylate-binding protein RBP47C-like [Cucumis
           sativus]
          Length = 429

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/86 (48%), Positives = 46/86 (53%)
 Frame = -1

Query: 258 DNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 79
           DNERSQAMTEMNG YCSSR MRIG ATP+K                              
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKK----SSGYQQQYSSQGYASNGSFSHGHQSD 292

Query: 78  XXXXXXTIFVGGLDPSVTDEDLRQTF 1
                 TIF+GGLDP+VTDEDL+Q F
Sbjct: 293 GDFTNTTIFIGGLDPNVTDEDLKQLF 318


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/86 (50%), Positives = 46/86 (53%)
 Frame = -1

Query: 258 DNERSQAMTEMNGQYCSSRQMRIGLATPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 79
           +NERSQAMTEMNG YCSSR MRIG ATPRK                              
Sbjct: 229 ENERSQAMTEMNGVYCSSRPMRIGAATPRK---------------SSGYQQQYSSHVQSD 273

Query: 78  XXXXXXTIFVGGLDPSVTDEDLRQTF 1
                 TIFVGGLDP+V+DEDLRQ F
Sbjct: 274 GDSMNTTIFVGGLDPNVSDEDLRQPF 299