BLASTX nr result

ID: Coptis25_contig00018472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018472
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|2...   281   8e-74
ref|XP_002525443.1| transcription factor, putative [Ricinus comm...   277   9e-73
ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-72
ref|XP_004141144.1| PREDICTED: uncharacterized protein LOC101206...   274   7e-72
ref|XP_003541969.1| PREDICTED: uncharacterized protein LOC100799...   274   1e-71

>ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|222862283|gb|EEE99789.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  281 bits (718), Expect = 8e-74
 Identities = 153/204 (75%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
 Frame = -1

Query: 594 YPSSR--FPERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERFIEAVNQLGGADK 421
           + SSR   P  +H+FLQ G N  GD+GLVLSTDAKPRLKW  +LHERFIEAVNQLGGADK
Sbjct: 13  HSSSRNSIPPERHLFLQVG-NGPGDSGLVLSTDAKPRLKWTTDLHERFIEAVNQLGGADK 71

Query: 420 ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANTGNNKAGFMAAEAGDRMCDASG 241
           ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN+G+NK+G +A   GDRM + + 
Sbjct: 72  ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVAV-VGDRMPEVNA 130

Query: 240 A----LTTGSQTNKSLQISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA 73
                L+ GSQTNKSL  SEAL++QIEVQRRL+EQLEVQRHLQLRIEAQGKYLQSVLEKA
Sbjct: 131 THINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKA 190

Query: 72  QETLGKQKLGVCTGLEDAKVHISQ 1
           QETLG+Q LG   GLE AKV +S+
Sbjct: 191 QETLGRQNLGT-VGLEAAKVQLSE 213


>ref|XP_002525443.1| transcription factor, putative [Ricinus communis]
           gi|223535256|gb|EEF36933.1| transcription factor,
           putative [Ricinus communis]
          Length = 419

 Score =  277 bits (709), Expect = 9e-73
 Identities = 151/204 (74%), Positives = 168/204 (82%), Gaps = 6/204 (2%)
 Frame = -1

Query: 594 YPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERFIEAVNQLGGADK 421
           + SSR   P  +H+FLQGG N  GD+GLVLSTDAKPRLKW  +LHE FIEAVNQLGGADK
Sbjct: 13  HSSSRMSIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTSDLHEHFIEAVNQLGGADK 71

Query: 420 ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANTGNNKAGFMAAEAGDRMCDAS- 244
           ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN+G+NK G   A  GDR+ + + 
Sbjct: 72  ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKIG-TGAVVGDRISETNV 130

Query: 243 ---GALTTGSQTNKSLQISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA 73
                L+ G+QTNK L I EAL+MQIEVQRRL+EQLEVQRHLQLRIEAQGKYLQSVLEKA
Sbjct: 131 THINNLSMGTQTNKGLHIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKA 190

Query: 72  QETLGKQKLGVCTGLEDAKVHISQ 1
           QETLG+Q LG   GLE AKV +S+
Sbjct: 191 QETLGRQNLG-SIGLEAAKVQLSE 213


>ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|222858078|gb|EEE95625.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  276 bits (707), Expect = 1e-72
 Identities = 154/211 (72%), Positives = 171/211 (81%), Gaps = 13/211 (6%)
 Frame = -1

Query: 594 YPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERFIEAVNQLGGADK 421
           + SSR   P  +H+FLQGG N  GD+GLVLSTDAKPRLKW P+LHERFIEAVNQLGGADK
Sbjct: 13  HSSSRMAIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADK 71

Query: 420 ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANTGNNKAGFMAAEAGDRMCDASG 241
           ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQAN G++K G +A   GDRM +A+ 
Sbjct: 72  ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVAV-VGDRMPEANA 130

Query: 240 A------LTTGSQTNK-----SLQISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYL 94
                  L+ GSQ NK     SL  SEAL+MQIEVQRRL+EQLEVQRHLQLRIEAQGKYL
Sbjct: 131 THININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYL 190

Query: 93  QSVLEKAQETLGKQKLGVCTGLEDAKVHISQ 1
           Q+VLEKAQETLG+Q LG   GLE AKV +S+
Sbjct: 191 QAVLEKAQETLGRQNLGT-VGLEAAKVQLSE 220


>ref|XP_004141144.1| PREDICTED: uncharacterized protein LOC101206445 [Cucumis sativus]
           gi|449489519|ref|XP_004158336.1| PREDICTED:
           uncharacterized protein LOC101225289 [Cucumis sativus]
          Length = 390

 Score =  274 bits (701), Expect = 7e-72
 Identities = 145/204 (71%), Positives = 166/204 (81%), Gaps = 15/204 (7%)
 Frame = -1

Query: 567 QHVFLQGGGNACG-DTGLVLSTDAKPRLKWMPELHERFIEAVNQLGGADKATPKTVMKLM 391
           +H+FLQGGGN  G D+GLVLSTDAKPRLKW P+LH+RF+EAVNQLGGADKATPKTVMK+M
Sbjct: 16  RHMFLQGGGNGGGGDSGLVLSTDAKPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIM 75

Query: 390 GIPGLTLYHLKSHLQKYRLSKNLHGQAN--TGNNKAGFMAAEAGDRMCDASGALTTG--- 226
           GIPGLTLYHLKSHLQKYRLSKNLHGQAN  +G NK G +A     R+ +A+GA       
Sbjct: 76  GIPGLTLYHLKSHLQKYRLSKNLHGQANGGSGTNKTGTVAVSVDQRLGEANGAAAAARTS 135

Query: 225 ---------SQTNKSLQISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA 73
                    SQ+NKSLQISE ++MQIEVQ+RL+EQLEVQRHLQLRIEAQGKYLQ+VLEKA
Sbjct: 136 NIVVGPQPTSQSNKSLQISETIQMQIEVQKRLHEQLEVQRHLQLRIEAQGKYLQTVLEKA 195

Query: 72  QETLGKQKLGVCTGLEDAKVHISQ 1
           QETLG+Q LG   GLE AKV +S+
Sbjct: 196 QETLGRQNLGT-VGLEAAKVQLSE 218


>ref|XP_003541969.1| PREDICTED: uncharacterized protein LOC100799064 [Glycine max]
          Length = 400

 Score =  274 bits (700), Expect = 1e-71
 Identities = 148/204 (72%), Positives = 166/204 (81%), Gaps = 6/204 (2%)
 Frame = -1

Query: 594 YPSSRFP--ERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERFIEAVNQLGGADK 421
           + SSR P    +H+FLQ G N  GD+GLVLSTDAKPRLKW P+LH RFIEAVNQLGGADK
Sbjct: 13  HSSSRMPIPSERHMFLQAG-NGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADK 71

Query: 420 ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANTGNNKAGFMAAEAGDRMCDASG 241
           ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQ+N   +K    +A  G+R+ + +G
Sbjct: 72  ATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKI-TTSATTGERLSETNG 130

Query: 240 A----LTTGSQTNKSLQISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA 73
                L+ G Q NK L ISEAL+MQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA
Sbjct: 131 THMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKA 190

Query: 72  QETLGKQKLGVCTGLEDAKVHISQ 1
           QETLG+Q LG+  GLE AKV +S+
Sbjct: 191 QETLGRQNLGI-VGLEAAKVQLSE 213


Top