BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018471
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    62   2e-07

>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
 Frame = -2

Query: 746 SSRKTIYLIICKLLGGGQSSTYQQAS--VNRIWSANLFRSWQLFMWEI---ICGCFDVLT 582
           SSR T Y+    LL     ST    +  VN+ W  N+    + FMW +   +  C + L 
Sbjct: 99  SSRSTYYIAWNSLLNFTPPSTSHGTAPVVNKCWRLNILHGVKHFMWRLNHNLLPCIENLK 158

Query: 581 SKNLFGDFACPFCFKNVETSYHLFSGCDWIRGIWFRSIISLRMDA-YNWNTRNWLDEIME 405
           ++ +     C  C   VET  ++F  C ++R  W    + LR+D     + +NW+++I  
Sbjct: 159 NRKIDMGEICSRCGGCVETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQI-- 216

Query: 404 WSIRKDEHVAKLAIFACILLQGIWAMRNSCKFEAR 300
            S+  D+ + K A    +LL   W +RN   FE +
Sbjct: 217 HSVGDDDFIEKFA----MLLWCYWNLRNKFIFERK 247