BLASTX nr result

ID: Coptis25_contig00018459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018459
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253...   135   1e-29
ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-27
ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|2...   117   4e-24
ref|XP_002520838.1| conserved hypothetical protein [Ricinus comm...    96   1e-17
ref|XP_002328989.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-16

>ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253378 [Vitis vinifera]
          Length = 208

 Score =  135 bits (341), Expect = 1e-29
 Identities = 89/218 (40%), Positives = 110/218 (50%), Gaps = 8/218 (3%)
 Frame = +3

Query: 120 MFSGNSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPK 299
           M     DVPQK LQIK+DDKF+SRLLSKESS+ANPS RVYYGG +GA+PF WESQPGTPK
Sbjct: 1   MLRSEQDVPQKRLQIKEDDKFFSRLLSKESSMANPSSRVYYGGVTGAVPFTWESQPGTPK 60

Query: 300 NKFCDXXXXXXXXXXXFH--XXXXXXXXXXXXXXLIHTIFPRLSVRKTH------ATXXX 455
             F +           ++                L+H+IFPR++    +       +   
Sbjct: 61  YTFSESSLPPLTPPPSYYSNSMDKKPNKKHSRSNLLHSIFPRMNHNNNNPKKPNVLSSPS 120

Query: 456 XXXXXXXXXXXXXXXXXXXXXXKTHRRLPSSLSTSSFDYRGDYEEPTLGSPTSTLCFSNV 635
                                    RR     S SSFD   DYEE  + SPTSTLCF   
Sbjct: 121 LSSSCSSWSSPRSSSMSGSLTPNFLRRRRCCSSRSSFDSGADYEEEAV-SPTSTLCF--- 176

Query: 636 SRKSSGGFKGCYSMVIIKNAFSSMIGGHGSNGHRQGTA 749
             +   G +G  S+V++K AF SM+ GHGS    QGTA
Sbjct: 177 --RMGSGLRGRCSVVVMKKAFLSMV-GHGSG---QGTA 208


>ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|222855153|gb|EEE92700.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  128 bits (322), Expect = 2e-27
 Identities = 78/186 (41%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
 Frame = +3

Query: 138 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 317
           D+PQK+LQIKQDDKF+SRLLS+ESS+ANPS RVYYGG S  +PF WESQPGTPK  FC+ 
Sbjct: 11  DLPQKALQIKQDDKFFSRLLSRESSMANPSFRVYYGGVSVGVPFVWESQPGTPKYTFCEN 70

Query: 318 XXXXXXXXXXFH-XXXXXXXXXXXXXXLIHTIFPRLSVRKTH--ATXXXXXXXXXXXXXX 488
                     ++               L+H +F R + +K +   +              
Sbjct: 71  TLPPLTPPPSYYRNSDKKTIKKHSRSSLLHLLFSRNNPKKNNVSTSATNLSSTPSSASWS 130

Query: 489 XXXXXXXXXXXKTHRRLPSSLSTSSFDYR--GDYEEPTLGSPTSTLCFSNVSRK-SSGGF 659
                      K H R   S   SSFD R   D EE  +GSPTSTLCF    R  S+GG 
Sbjct: 131 SLNSSSLLTPRKYHERSRYSSRGSSFDSRVFEDVEESHMGSPTSTLCFGISGRNASTGGL 190

Query: 660 KGCYSM 677
           +GCY +
Sbjct: 191 RGCYGV 196


>ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|222868288|gb|EEF05419.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  117 bits (293), Expect = 4e-24
 Identities = 76/192 (39%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
 Frame = +3

Query: 138 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 317
           D PQK+L++KQDDKF+SRL+SKE+S+ANPS RVYYGG S A+PF WESQPGTPK  FC+ 
Sbjct: 10  DHPQKALEMKQDDKFFSRLMSKENSMANPSFRVYYGGVSVAVPFVWESQPGTPKYTFCEK 69

Query: 318 XXXXXXXXXXFH-XXXXXXXXXXXXXXLIHTIFPRLSVRKTHAT------XXXXXXXXXX 476
                     ++               L+  +FPR ++RKT+ +                
Sbjct: 70  TLPPLTPPPSYYTNSNKKPTKNHSRSNLLRFLFPRNNLRKTNVSSSATNLSTSPSSASWS 129

Query: 477 XXXXXXXXXXXXXXXKTHRRLPSSLSTSSFDYR--GDYEEP-TLG-SPTSTLCFSNVSRK 644
                          K H R   S   SSFD R   D+EE   +G SP+S LCF    R 
Sbjct: 130 SLTSSSNLRSLSTPRKYHERSGFSSRGSSFDSRVFDDFEESHNMGSSPSSKLCFGISGRS 189

Query: 645 -SSGGFKGCYSM 677
            S+GG +GCY +
Sbjct: 190 TSTGGLRGCYGV 201


>ref|XP_002520838.1| conserved hypothetical protein [Ricinus communis]
           gi|223539969|gb|EEF41547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 72/220 (32%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
 Frame = +3

Query: 132 NSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKN-KF 308
           + ++ Q+SL+IK+D+KF++R++SKE+S+AN S RVYYGGASGA+PF WES+PGTPK+  F
Sbjct: 8   HDELNQESLEIKKDEKFFTRIMSKETSMANSSCRVYYGGASGAVPFTWESRPGTPKHTSF 67

Query: 309 CD---XXXXXXXXXXXFHXXXXXXXXXXXXXXLIHTIFPRLSVRKTHATXXXXXXXXXXX 479
            D              +               L +TI PRL  +KT              
Sbjct: 68  ADNTSNIPPLTPPPSYYSTSKSKSMRKRTKQNLFNTIIPRLMTKKTSHVSPSSSMSSTTT 127

Query: 480 XXXXXXXXXXXXXXKTH-----------RRLPSSL-STSSFDYRGDYEEPTLG---SPTS 614
                           H           R+ P  + S S   Y  D ++   G     +S
Sbjct: 128 SSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLELFSSS 187

Query: 615 TLCFSNVSRKSSGGFKGCYSMVIIKNAFSSMIGGHGSNGH 734
            LC+   S K    F G Y M  +K+A  S++ GHG+NGH
Sbjct: 188 RLCYGGKS-KGLNVFGGRYIMENMKSALLSIV-GHGNNGH 225


>ref|XP_002328989.1| predicted protein [Populus trichocarpa] gi|222839223|gb|EEE77574.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = +3

Query: 120 MFSGNSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPK 299
           M S   +V Q+SL+IKQ+DKF++R++SKESS+AN S RVYYGGASGAIPF WES+PGTPK
Sbjct: 1   MPSDGQEVSQQSLEIKQNDKFFTRIMSKESSMANSSNRVYYGGASGAIPFMWESRPGTPK 60

Query: 300 NKFCD 314
           +   D
Sbjct: 61  HTLAD 65


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