BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018446
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...   102   1e-19
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   101   2e-19
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    94   4e-17

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  103 bits (258), Expect = 5e-20
 Identities = 94/324 (29%), Positives = 139/324 (42%), Gaps = 38/324 (11%)
 Frame = -1

Query: 948 EMVQTCVLSKRWRNVWSTVPSFHFGHDLYLSKKKHDFFK--------FVESVLFRRDGLD 793
           ++VQTCVLSKRW NVW + P   F  + + S    D+++        F+  VL RR+   
Sbjct: 37  QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYEDEMVNFTDFINQVLVRRNNFK 96

Query: 792 IQKISLSLGYKTRSGDVHRVNSWIIYALRHNVQVLHISND-DDTSIALSAQIFTCESLRE 616
             KISL L   TR      V S I YA++H+ + + I     D  I L    F CESLR 
Sbjct: 97  AIKISLDLCGHTR---YSLVESLIYYAVKHHAEEICIDTACRDVPIVLPRCFFNCESLRS 153

Query: 615 FKL-CNEDLKLPTLISLPVLTTLHLSSVEILNGHLHVAFFSACPCLETLILEE-----CE 454
            KL  +  + LP  + LP L TLHL   +  +G +    FS+CP LE L +E+      E
Sbjct: 154 LKLRIDGGIALPKSLGLPSLKTLHLGGAQNFDGKI----FSSCPNLENLTIEDICLNTIE 209

Query: 453 FVNCYTVTISASQLKNLR-XXXXXXXXXXXSTPKLVSIEMIGMENPSIRFTCELKFISDV 277
             N + + + + ++ N R              PKL S +  G   P       L  + DV
Sbjct: 210 NFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDG-NTPLFWSEVNLTSLDDV 268

Query: 276 NFDIEL--------------------DQSSESTAL-LISTVRNAXXXXXXXXXXXSIYV- 163
           N  ++                     D++ +   L L+  +               I V 
Sbjct: 269 NVVLQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVL 328

Query: 162 ENDPSLFSRIQTPFSNLKWLKIGT 91
              P+  ++  +PFSNLK+LK+ T
Sbjct: 329 SKVPAALNKHPSPFSNLKYLKLKT 352


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  102 bits (255), Expect = 1e-19
 Identities = 95/324 (29%), Positives = 134/324 (41%), Gaps = 38/324 (11%)
 Frame = -1

Query: 948  EMVQTCVLSKRWRNVWSTVPSFHFGHDLYLSKKKHDFF--------KFVESVLFRRDGLD 793
            ++VQTCVLSKRW NVW + P   F  + + S    D++         F+  VL RR  L 
Sbjct: 56   QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDEVNNFTDFIYHVLVRRHNLK 115

Query: 792  IQKISLSLGYKTRSGDVHRVNSWIIYALRHNVQVLHISNDD-DTSIALSAQIFTCESLRE 616
              KISL +   TR      V S I YA++H+V+ + ++    D  I L    F CESLR 
Sbjct: 116  AVKISLDILRDTRCS---LVESLIYYAVKHHVEEISVNTAHWDMPIVLPRCFFDCESLRS 172

Query: 615  FKL-CNEDLKLPTLISLPVLTTLHLSSVEILNGHLHVAFFSACPCLETLILEECEFVNCY 439
             KL  +  + LP  + L  L TLHL      +G +    FS CP LE L +E+       
Sbjct: 173  LKLKVDGGIALPKSLGLQSLKTLHLGGARNFDGKI----FSTCPNLENLKIEDIYLNTIE 228

Query: 438  TVTISASQLKNLR------XXXXXXXXXXXSTPKLVSIEMIGMENPSIRFTCELKFISDV 277
               I A  LK+L                    PKL S +  G   P       L  + DV
Sbjct: 229  NFNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFKFYG-NTPLFWSEVNLTSLDDV 287

Query: 276  N--------------------FDIELDQSSESTAL-LISTVRNAXXXXXXXXXXXSIYVE 160
            N                    +  E D++ +   L LI  +               I + 
Sbjct: 288  NVVLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEIL 347

Query: 159  ND-PSLFSRIQTPFSNLKWLKIGT 91
            ++ P+   +  +PFSNLK+LK+ T
Sbjct: 348  SEVPAALDKHPSPFSNLKYLKLKT 371


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  101 bits (252), Expect = 2e-19
 Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 38/324 (11%)
 Frame = -1

Query: 948  EMVQTCVLSKRWRNVWSTVPSFHFGHDLYLSKKKHDFF--------KFVESVLFRRDGLD 793
            ++VQTCVLSKRW NVW + P   F  + + S    D++         F+  VL RR+ + 
Sbjct: 56   QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDDMNNFTDFIYHVLVRRNNVK 115

Query: 792  IQKISLSLGYKTRSGDVHRVNSWIIYALRHNVQVLHISNDD-DTSIALSAQIFTCESLRE 616
              K+SL      R      V S I YA++H+V+ + I+    D  I L    F CESLR 
Sbjct: 116  AFKLSLD---TRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLRS 172

Query: 615  FKL-CNEDLKLPTLISLPVLTTLHLSSVEILNGHLHVAFFSACPCLETLILEE-----CE 454
             KL  +  L LP  + L  L TLHL   +  +G +    FS+CP LE L +E+      E
Sbjct: 173  LKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKI----FSSCPNLENLTIEDICLNVIE 228

Query: 453  FVNCYTVTISASQLKNLR-XXXXXXXXXXXSTPKLVSIEMIGMENPSIRFTCELKFISDV 277
              N + +++ + ++ N R              PKL S +  G   P       L  + DV
Sbjct: 229  NFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDG-NTPLFWSDVNLTSLDDV 287

Query: 276  N--------------------FDIELDQSSESTAL-LISTVRNAXXXXXXXXXXXSIYVE 160
            N                    +  E D++ +   L LI  +               I + 
Sbjct: 288  NVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEIL 347

Query: 159  ND-PSLFSRIQTPFSNLKWLKIGT 91
            ++ P+   +  +PFSNLK+LK+ T
Sbjct: 348  SEVPAALDKHPSPFSNLKYLKLKT 371


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 16/241 (6%)
 Frame = -1

Query: 948 EMVQTCVLSKRWRNVWSTVPSFHFGHD--------LYLSKKKHDFFKFVESVLFRRDGLD 793
           ++VQTCVLSKRW NVW + P   F  +         Y     ++F  F+  VL RR+ + 
Sbjct: 37  QVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLISSYYYDDDMNNFTDFISHVLVRRNNVK 96

Query: 792 IQKISLSLGYKTRSGDVHRVNSWIIYALRHNVQVLHISNDD-DTSIALSAQIFTCESLRE 616
             K+SL      R      V S I YA++H+V+ + I+    D  I L    F CESLR 
Sbjct: 97  AFKLSLD---TRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLRS 153

Query: 615 FKL-CNEDLKLPTLISLPVLTTLHLSSVEILNGHLHVAFFSACPCLETLILEE-----CE 454
            KL  +  L LP  + L  L TLHL   +  +G +    FS+CP LE L +E+      E
Sbjct: 154 LKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKI----FSSCPNLENLTIEDICLNVIE 209

Query: 453 FVNCYTVTISASQLKNLR-XXXXXXXXXXXSTPKLVSIEMIGMENPSIRFTCELKFISDV 277
             N + +++ + ++ N R              PKL S +  G   P       L  + DV
Sbjct: 210 NFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFYG-NTPLFWSEVNLTSLDDV 268

Query: 276 N 274
           N
Sbjct: 269 N 269


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 70/195 (35%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
 Frame = -1

Query: 957 PVEEMVQTCVLSKRWRNVWSTVPSFHFGHDLYLS--------KKKHDFFKFVESVLFRRD 802
           P +  V T +LSKRWR +W++VP   F  +L+L+        ++   F  FV+ VL   +
Sbjct: 28  PTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNFVDGVLRHSE 87

Query: 801 GLDIQKISLSLGYKTRSGDVHRVNSWIIYALRHNVQVLHISNDDDTSIALSAQIFTCESL 622
              I+K  L  GY  R  ++  V SWI  AL   VQ L +    D  + L    F C++L
Sbjct: 88  VSCIKKFRL--GY--RDNNLDSVYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTL 143

Query: 621 REFKL-CNEDLKLPTLISLPVLTTLHLSSVEILNGHLHVAFFSACPCLETLILEECEFVN 445
              KL C   L +PT + LP L  LHL SVE  +        S CP LE L++E  E  N
Sbjct: 144 VVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDN 203

Query: 444 CYTVTISASQLKNLR 400
            + V +S   LK LR
Sbjct: 204 QWVVNVSNPSLKILR 218