BLASTX nr result

ID: Coptis25_contig00018430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018430
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...   230   7e-58
ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-52
ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
dbj|BAK61857.1| ankyrin repeat family protein [Citrus unshiu]         201   3e-49
dbj|BAK61845.1| ankyrin repeat family protein [Citrus unshiu]         197   7e-48

>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
            At2g01680-like [Vitis vinifera]
          Length = 450

 Score =  230 bits (587), Expect = 7e-58
 Identities = 139/332 (41%), Positives = 205/332 (61%), Gaps = 20/332 (6%)
 Frame = +3

Query: 138  MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 317
            M+ R+L+AA++G+ E + +LLRE+P +L T AL+S E+ LHI+S+ GHVDF +++++L+ 
Sbjct: 1    MDRRLLDAAQAGNVEDLHQLLRENPLILHTTALASAENPLHISSISGHVDFVKELIRLKP 60

Query: 318  SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 497
                ELNQDG+S +H+++ +G+ E+V  LL+F        + C       ++P HCA +K
Sbjct: 61   DFIKELNQDGFSPIHMAAANGHQEVVMELLKFD------WKXCHLEGRDEKTPLHCAAMK 114

Query: 498  GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKL----LINFI 665
            GK++V+ V+L AC E   ++T Q E  LHLAVKN+Q EA   L+E ++ ++    ++N  
Sbjct: 115  GKVNVVRVILSACKECIEDVTVQKEIALHLAVKNSQYEAVRVLVE-KVREMRREDVLNMK 173

Query: 666  DNEGNNILHLATAGKQYQIISFLLKEASL------NVNAVNSRGLTALDVLLTVPSESND 827
            D  GN ILHLAT  KQ Q   FLL +A++       VN +N+ GLTALDVLL  PSE+ D
Sbjct: 174  DEHGNTILHLATWRKQRQ-AKFLLGDATIPGSGVTEVNLMNNSGLTALDVLLIFPSEAGD 232

Query: 828  IELVEMLRSAGGKRSLDHQEPPMQGQITSSIHGTV---------NQRVDQ-NTTRGGDRV 977
             E+ E+L SAG KR+ D   PP   Q  + ++ T          N  V+     RG D  
Sbjct: 233  REIKEILHSAGAKRAQDIAFPPFGTQNHARLNSTTTVETCPMQPNNLVNYFRFHRGRDSP 292

Query: 978  AEMRNGILMMASLTATMTFQAALAPPGGFWQD 1073
             E R+ +L++A L AT T+Q  L+PPGG WQD
Sbjct: 293  GEARSALLVIAVLVATATYQVGLSPPGGVWQD 324


>ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1|
            predicted protein [Populus trichocarpa]
          Length = 448

 Score =  211 bits (536), Expect = 6e-52
 Identities = 125/329 (37%), Positives = 194/329 (58%), Gaps = 17/329 (5%)
 Frame = +3

Query: 138  MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 317
            M+ R+ EAAR+G+ + + +LL E+P +L    LS+ E+ L+IA+  GHVDF ++I++L+ 
Sbjct: 1    MDTRLFEAARTGNIDYLQQLLAENPFILNNTQLSA-ENPLNIAAAMGHVDFVKEIIRLKP 59

Query: 318  SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 497
              A+E+NQ+G+S MHI++ +G VEI   L+E      +  ++C        +PFH A I+
Sbjct: 60   VFAIEVNQEGFSPMHIAADNGQVEIAKELME------VDIKLCRLEGRQKMTPFHHAAIR 113

Query: 498  GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIE---GQISKLLINFID 668
            G+  V+ ++L  CP+   + T++ E+ LHLAV+NN+ EA   L++       + L+N  D
Sbjct: 114  GRAEVISLMLSGCPDCIEDETERRESALHLAVRNNRFEAIKKLVDWIREMNKEYLLNMKD 173

Query: 669  NEGNNILHLATAGKQYQIISFLL-----KEASLNVNAVNSRGLTALDVLLTVPSESNDIE 833
             +GN +LHLA+  KQ ++I   L        SL VNA+N  G+TALDV+L  PSE+ D E
Sbjct: 174  EQGNTVLHLASWKKQRRVIEIFLGSGSASTGSLEVNAINHTGITALDVILLFPSEAGDRE 233

Query: 834  LVEMLRSAGGKRSLDHQEPPMQGQITSSIHGTVNQRVDQNT---------TRGGDRVAEM 986
            +VE+LRSAG  R+ D     +    TS+ + +  +R   N           +  D  +E 
Sbjct: 234  IVEILRSAGAMRARDSVPSTVTNSQTSTDNPSTPERCWSNRDNLVEYFKFKKDRDSPSEA 293

Query: 987  RNGILMMASLTATMTFQAALAPPGGFWQD 1073
            R  +L++A L AT TFQ  + PPGG WQD
Sbjct: 294  RGTLLVIAVLVATATFQVGVGPPGGVWQD 322


>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
            predicted protein [Populus trichocarpa]
          Length = 459

 Score =  205 bits (522), Expect = 2e-50
 Identities = 123/332 (37%), Positives = 197/332 (59%), Gaps = 22/332 (6%)
 Frame = +3

Query: 138  MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 317
            M+ R+ +A  SG       LL EDP +L   +L+S E+ LH++S+ GH++  R++   + 
Sbjct: 1    MDSRLSDAILSGDIAAFRSLLAEDPLILDRISLNSTENPLHLSSLAGHLEITREVACQKP 60

Query: 318  SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 497
            + A ELNQDG+S +HI+S++G+VE+V  LL  G       +IC+ +   G++P H A +K
Sbjct: 61   AFARELNQDGFSPVHIASSNGHVELVRELLRVG------YDICLLKGKDGKTPLHLAAMK 114

Query: 498  GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKL----LINFI 665
            G++ +++ L+ ACP+S  E+T   ETVLH+AVK+NQ EA   L+E +I KL    ++N+ 
Sbjct: 115  GRVDIVKELVCACPQSVKEVTICGETVLHVAVKSNQAEAVKVLLE-EIKKLDMMEIVNWK 173

Query: 666  DNEGNNILHLATAGKQYQIISFLL-KEA---SLNVNAVNSRGLTALDVL---LTVPSESN 824
            D +GN I+HLAT  KQ++ I  L+ +EA    + VN++N+ G TA DVL   L    E N
Sbjct: 174  DKDGNTIMHLATLRKQHETIRLLIGREAIAYGVEVNSINASGFTAKDVLDFILQSGGEYN 233

Query: 825  DIELVEMLRSAGGKRSLDHQEPPMQ------GQITSSIHGTVNQRVDQNTTRG-----GD 971
            DI ++EM + AG  +++D    P          I  +++ T       N  +       +
Sbjct: 234  DISILEMFQQAGAMKAMDITTNPASTFQVEVKNINKNVNHTSQNSCPWNLWKELKLEIEE 293

Query: 972  RVAEMRNGILMMASLTATMTFQAALAPPGGFW 1067
               E +N ++++A+L AT+T+QA L+PP GFW
Sbjct: 294  SSTETQNALMVVATLIATVTYQATLSPPSGFW 325


>dbj|BAK61857.1| ankyrin repeat family protein [Citrus unshiu]
          Length = 473

 Score =  201 bits (512), Expect = 3e-49
 Identities = 139/446 (31%), Positives = 220/446 (49%), Gaps = 5/446 (1%)
 Frame = +3

Query: 138  MNGRVLEAARSGSTETMLELLREDPSVLATFALSSR-ESLLHIASMFGHVDFARQILQLQ 314
            M  R+ EAA  GS  +++ LL+ED  VL  F +S   E+ LHIASM GHVDF ++I+  +
Sbjct: 1    MERRIYEAAVDGSVASLIHLLQEDALVLDRFMVSCHAETPLHIASMLGHVDFVQEIVSQK 60

Query: 315  QSSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVI 494
               A EL+    S +H++S  G + IV  L+      S+  E+C  R+  GR+P H A I
Sbjct: 61   PELAGELDSRKASPLHVASAKGYLVIVKKLV------SVNPEMCYVRDRDGRNPLHVAAI 114

Query: 495  KGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKLLINFIDNE 674
            KG ++V+  L+   P++A  L D+ ET+LH  V+ NQ E+  FL++    +  +N+ +N+
Sbjct: 115  KGHVNVLRELVQVRPQAARMLMDRGETILHACVRYNQLESMKFLLDILSDREFVNYKNND 174

Query: 675  GNNILHLATAGKQYQIISFLLKEASLNVNAVNSRGLTALDVLLTVPSESNDIELVEMLRS 854
            GN ILHLA A KQ + I  L    ++ VNA+N+ GL ALD+L  +  +  D E++E+L  
Sbjct: 175  GNTILHLAVADKQTEAIKVLTTSTTIEVNALNANGLAALDILPQIKGDEKDSEIIELLGR 234

Query: 855  AGGKRSLDHQEPPMQGQITSSIHGTVNQRVDQNTTRGG--DRVAEMRNGILMMASLTATM 1028
            A    + D  +   + +  +     VN   + N  R    D + + R+ ++++ASL ATM
Sbjct: 235  ASAISARDEGKKKKKKKTKTPSKSHVN---NDNLARRDEYDWLRKKRSTLMVVASLIATM 291

Query: 1029 TFQAALAPPGGFWQDWXXXXXXXXXXXXXXXXXAPPPRPEHKPGTVVIYDLNRKDFTSFL 1208
             FQ    PPGG WQD                       P H  G+ ++ DL+ + +  FL
Sbjct: 292  AFQVGANPPGGLWQD---------------NFVGDEKTPAHNAGSSILADLSPEAYGHFL 336

Query: 1209 FWDXXXXXXXXXXXXXXXXPMPFKHDSTRWT--VVRYSIYTVVFSVLLIFTEAVQLTTNK 1382
              +                 +P ++    W   V+ +   T +    L+   A       
Sbjct: 337  TSNSIAFVASLSIILLLVSGLPIRNRILMWVLMVIMWVAITAIAVTYLLSMSAFTPAHEA 396

Query: 1383 KIYYQKSFIGFIVFLCLWLPIGLVAL 1460
              Y   S IG+++   +W  IGL A+
Sbjct: 397  NTY--ASVIGYVIL--VW--IGLCAI 416


>dbj|BAK61845.1| ankyrin repeat family protein [Citrus unshiu]
          Length = 477

 Score =  197 bits (501), Expect = 7e-48
 Identities = 134/439 (30%), Positives = 218/439 (49%), Gaps = 22/439 (5%)
 Frame = +3

Query: 135  KMNGRVLEAARSGSTETMLELLREDPSVL-ATFALSSRESLLHIASMFGHVDFARQILQL 311
            +M   + EA+  G+  T+L+LL +DP +L    A    E+ LH+A++ GH+ FA++IL+ 
Sbjct: 3    RMESLLYEASVEGNITTLLQLLEQDPLILDKVVANRHHETPLHVAALRGHLHFAKEILRR 62

Query: 312  QQSSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAV 491
                A EL+  G S +H+++  G V+IV  LL+      +  ++C+ R++ GR+P H A 
Sbjct: 63   TPVLAGELDSRGSSPLHMAAQKGYVDIVKELLQ------VNPDMCLARDVDGRNPLHVAA 116

Query: 492  IKGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKLLINFIDN 671
            +KG+I V+  L  A P +AY  T  +ETVLHL VK+NQ EA  FL+        +N  D+
Sbjct: 117  MKGRIQVLVELFRARPFAAYSTTIWNETVLHLCVKHNQFEALKFLVSIMNDPDFLNAKDD 176

Query: 672  EGNNILHLATAGKQYQIISFLLKEASLNVNAVNSRGLTALDVLLTVPSESNDIELVEMLR 851
             G +ILHLA A KQ + I++LL    + VNA+N+ G TALD+L     +  D+++ + LR
Sbjct: 177  YGMSILHLAVADKQIETINYLLVNTRVEVNALNTHGYTALDILAQSRRDIKDLDIADSLR 236

Query: 852  SAGGKRSLDHQEPPMQGQITSSIHGTVNQRVDQNT---------------------TRGG 968
             AG  ++++ Q   +    TS      N R   N+                      +  
Sbjct: 237  GAGAFKAIEIQS-SLNRNSTSIGRSVRNNRAVSNSIIPHDQLKALPQECLINLQQKNKTE 295

Query: 969  DRVAEMRNGILMMASLTATMTFQAALAPPGGFWQDWXXXXXXXXXXXXXXXXXAPPPRPE 1148
            D +   R+ ++++ASL ATM FQA + PPGG WQD                         
Sbjct: 296  DWLTRKRDALMVVASLIATMAFQAGVNPPGGVWQD--------DFPGPGDGSQENSTAEA 347

Query: 1149 HKPGTVVIYDLNRKDFTSFLFWDXXXXXXXXXXXXXXXXPMPFKHDSTRWTVVRYSIYTV 1328
            H+ GT +I    R  + ++L ++                 +PFK     W V+  +++  
Sbjct: 348  HQAGTAIIAYKYRSRYANYLAFNTAGFISSLSIILLLITGLPFKRRFFMW-VLTVTVWIA 406

Query: 1329 VFSVLLIFTEAVQLTTNKK 1385
            + S+ L +  ++ + T KK
Sbjct: 407  ITSMALTYRVSILVFTPKK 425


Top