BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018427
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   379   e-103
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   359   6e-97
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   330   3e-88
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   327   3e-87

>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  384 bits (985), Expect = e-104
 Identities = 195/278 (70%), Positives = 226/278 (81%), Gaps = 4/278 (1%)
 Frame = +2

Query: 2    YQSWLPTVLQLTQSDKEDIL----TFPHCMSGSLKTTRKSGVERGFKGKTYPRLVKMVLS 169
            YQSWLPTVL+LT+   E ++     F  C SGSLKT R+ GVERGFKGK+YPRL KMVLS
Sbjct: 218  YQSWLPTVLKLTRPYDESLVPGVNNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLS 277

Query: 170  ATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSYKLICESKLKPLCLIALLQDLKEE 349
            ATLT DPSKL+QL+LHHPLFLTTG +RYQLPEKL+SYKLIC SKLKPL L+A+LQ L  E
Sbjct: 278  ATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGE 337

Query: 350  KCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQRQSVRSKTLKEFRDGDIQVLVASD 529
            KCIVFTSSVESTHRL TLL  FG L+ KIK+YSGLQRQSVRSKTLK FR+G+IQVLV+SD
Sbjct: 338  KCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSD 397

Query: 530  AMTRGMDVEGVRTVINYDVPAYIKTYIHXXXXXXXXXXXXXCFTLLRKHEVKRFKKLLQK 709
            AMTRGMD+EGVR +INYD+PAY+KTY+H             C TLLR HEVKRFKKLLQK
Sbjct: 398  AMTRGMDIEGVRNIINYDMPAYVKTYVHRAGRTARAGQTGRCITLLRTHEVKRFKKLLQK 457

Query: 710  ADHNTCSVYPIAADSIESLRPEYTSALEKLKKCVESET 823
            AD+++C +Y I + S++SL P Y SALEKLK+ V+SET
Sbjct: 458  ADNDSCPIYSIPSSSVKSLHPFYLSALEKLKETVQSET 495


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus]
          Length = 517

 Score =  379 bits (974), Expect = e-103
 Identities = 198/279 (70%), Positives = 223/279 (79%), Gaps = 5/279 (1%)
 Frame = +2

Query: 2    YQSWLPTVLQLTQSDKEDILTFPH-----CMSGSLKTTRKSGVERGFKGKTYPRLVKMVL 166
            YQSWLPTVLQLT +D   I+ FP      C  GSLKT R+ GVERGFKGK YPRL KMVL
Sbjct: 215  YQSWLPTVLQLTHADDSSII-FPSYISNPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVL 273

Query: 167  SATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSYKLICESKLKPLCLIALLQDLKE 346
            SATLT DP KL+QLDLHHPLFLTTG +RY+LPEKL+SY +ICESKLKPL L+ALLQ L E
Sbjct: 274  SATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPLYLVALLQSLGE 333

Query: 347  EKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQRQSVRSKTLKEFRDGDIQVLVAS 526
            EKCIVFTSSVESTHRL +LL  F  LE KIK+YSGLQRQS+RSKTL  FR G+IQVLV+S
Sbjct: 334  EKCIVFTSSVESTHRLCSLLNFFEDLELKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSS 393

Query: 527  DAMTRGMDVEGVRTVINYDVPAYIKTYIHXXXXXXXXXXXXXCFTLLRKHEVKRFKKLLQ 706
            DAMTRGMDVEGV+ VINYD+PA+IKTYIH             CFTLLRK EVKRFKKLLQ
Sbjct: 394  DAMTRGMDVEGVKNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQ 453

Query: 707  KADHNTCSVYPIAADSIESLRPEYTSALEKLKKCVESET 823
            KAD+++C V+ + + SIE L+P Y SALEKLK+ VESET
Sbjct: 454  KADNDSCPVHNLPSSSIEFLQPTYVSALEKLKEKVESET 492


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
            gi|297740757|emb|CBI30939.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  359 bits (921), Expect = 6e-97
 Identities = 188/278 (67%), Positives = 215/278 (77%), Gaps = 4/278 (1%)
 Frame = +2

Query: 2    YQSWLPTVLQLTQSDKEDIL----TFPHCMSGSLKTTRKSGVERGFKGKTYPRLVKMVLS 169
            YQSWLPTVLQLT+S  E +     T      GS+ T R+ GVERGFKG++YPRLVK+VLS
Sbjct: 215  YQSWLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLS 274

Query: 170  ATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSYKLICESKLKPLCLIALLQDLKEE 349
            ATLT DPSKL+ LDLHHPL LT G +RYQLPEKLKS+KLICESKLKPL L+ALL+DL  E
Sbjct: 275  ATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLICESKLKPLYLVALLRDLGGE 334

Query: 350  KCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQRQSVRSKTLKEFRDGDIQVLVASD 529
            KCIVFTSSVES HRL TLL  FG L+ KI +YSGLQ Q VRSKTL+EFR G IQVL++SD
Sbjct: 335  KCIVFTSSVESAHRLCTLLNFFGDLQIKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSD 394

Query: 530  AMTRGMDVEGVRTVINYDVPAYIKTYIHXXXXXXXXXXXXXCFTLLRKHEVKRFKKLLQK 709
             MTRGMDVEGVR VINYDVP +IKTYIH             CFTLLRK E KRFK+LLQK
Sbjct: 395  GMTRGMDVEGVRNVINYDVPKFIKTYIHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQK 454

Query: 710  ADHNTCSVYPIAADSIESLRPEYTSALEKLKKCVESET 823
            AD ++C V+ +A++SIE+L   Y SALEKLK+ V SET
Sbjct: 455  ADSDSCPVHSVASNSIEALHSVYVSALEKLKETVVSET 492


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
            lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
            ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  330 bits (846), Expect = 3e-88
 Identities = 171/279 (61%), Positives = 204/279 (73%), Gaps = 6/279 (2%)
 Frame = +2

Query: 2    YQSWLPTVLQLTQSDKEDILTFPHCMS------GSLKTTRKSGVERGFKGKTYPRLVKMV 163
            YQSWLPTVLQLTQ+  + +  FP C        GSL+T R+  VERGFKGK YPRLVKMV
Sbjct: 217  YQSWLPTVLQLTQTSDDGL--FPSCTPFVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMV 274

Query: 164  LSATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSYKLICESKLKPLCLIALLQDLK 343
            LSATLT DPSKL QLDLHHPLF+TTG  RY+LPEKL+  +LICE+ +KP+ L+ALL+  +
Sbjct: 275  LSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWE 334

Query: 344  EEKCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQRQSVRSKTLKEFRDGDIQVLVA 523
             EKCI+FTSSVE+T RL  LL  FG  + K K+YSG   QSVRSK LK FR GDIQVLVA
Sbjct: 335  GEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSVRSKELKAFRKGDIQVLVA 394

Query: 524  SDAMTRGMDVEGVRTVINYDVPAYIKTYIHXXXXXXXXXXXXXCFTLLRKHEVKRFKKLL 703
            SDA+TRGMDV+GV  VINYD+P + KT+IH             CFTLL  HEV+RF KLL
Sbjct: 395  SDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLL 454

Query: 704  QKADHNTCSVYPIAADSIESLRPEYTSALEKLKKCVESE 820
            +K   ++C +YPI   S++S+R  YT ALEKLK+ VESE
Sbjct: 455  KKVGSDSCPIYPIPPTSLDSIRATYTPALEKLKELVESE 493


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
            gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box
            ATP-dependent RNA helicase 1 gi|332658259|gb|AEE83659.1|
            RNA helicase 1 [Arabidopsis thaliana]
          Length = 522

 Score =  327 bits (837), Expect = 3e-87
 Identities = 168/277 (60%), Positives = 202/277 (72%), Gaps = 4/277 (1%)
 Frame = +2

Query: 2    YQSWLPTVLQLTQSDKEDILT----FPHCMSGSLKTTRKSGVERGFKGKTYPRLVKMVLS 169
            YQSWLPTVLQLTQ+  + +      F     GSL+T R+  VERGFKGK YPRLVKMVLS
Sbjct: 217  YQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLS 276

Query: 170  ATLTHDPSKLSQLDLHHPLFLTTGSQRYQLPEKLKSYKLICESKLKPLCLIALLQDLKEE 349
            ATLT DPSKL QLDLHHPLF+TTG  RY+LPEKL+  +LICE+ +KP+ L+ALL+  + E
Sbjct: 277  ATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGE 336

Query: 350  KCIVFTSSVESTHRLSTLLKCFGGLEFKIKKYSGLQRQSVRSKTLKEFRDGDIQVLVASD 529
            KCI+FTSSVE+T RL  LL  FG  + K K+YSG   QS+RSK LK FR GDIQVLVASD
Sbjct: 337  KCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASD 396

Query: 530  AMTRGMDVEGVRTVINYDVPAYIKTYIHXXXXXXXXXXXXXCFTLLRKHEVKRFKKLLQK 709
            A+TRGMDV+GV  VINYD+P + KT+IH             CFTLL  HEV+RF KLL+K
Sbjct: 397  ALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEK 456

Query: 710  ADHNTCSVYPIAADSIESLRPEYTSALEKLKKCVESE 820
               ++C +YPI   S++S+R  YT ALEKLK+ VESE
Sbjct: 457  VGSDSCPIYPIPPTSLDSIRATYTPALEKLKELVESE 493