BLASTX nr result

ID: Coptis25_contig00018422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018422
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21316.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249...   257   9e-67
ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215...   253   1e-65
ref|XP_002512894.1| conserved hypothetical protein [Ricinus comm...   253   2e-65
ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA do...   251   6e-65

>emb|CBI21316.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  259 bits (663), Expect = 2e-67
 Identities = 124/167 (74%), Positives = 142/167 (85%)
 Frame = -2

Query: 502 MNGTFNPQILVEKLARLNSSQQSIETLSHWCIFHMNKAKQVVETWAKQFHCSPRDQRLSF 323
           M  TFNP IL+EKL++LNSSQQSIETLSHWCIFHMNKAKQVVETW +QFHCSP +QRL+F
Sbjct: 1   MGSTFNPLILIEKLSKLNSSQQSIETLSHWCIFHMNKAKQVVETWDRQFHCSPSEQRLAF 60

Query: 322 LYLANDILQNSRRKGSEFVAEFWKFLPEALGEVIENGDEFAKNAALRLVNIWEERKVFGS 143
           LYLANDILQNSRRKGSEFV EFWK LP+AL +V+ENGDEF +NA LRL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVMENGDEFGRNAVLRLIGIWEERKVFGS 120

Query: 142 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVY 2
           RG+ILKE   GR LEN++++ K    K+KQS GN LEKI S Y V+Y
Sbjct: 121 RGQILKEEFGGRQLENSNRNGKHLGFKLKQSAGNTLEKIVSGYQVIY 167


>ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249768 [Vitis vinifera]
          Length = 530

 Score =  257 bits (657), Expect = 9e-67
 Identities = 125/173 (72%), Positives = 144/173 (83%), Gaps = 6/173 (3%)
 Frame = -2

Query: 502 MNGTFNPQILVEKLARLNSSQQSIETLSHWCIFHMNKAKQVVETWAKQFHCSPRDQRLSF 323
           M  TFNP IL+EKL++LNSSQQSIETLSHWCIFHMNKAKQVVETW +QFHCSP +QRL+F
Sbjct: 1   MGSTFNPLILIEKLSKLNSSQQSIETLSHWCIFHMNKAKQVVETWDRQFHCSPSEQRLAF 60

Query: 322 LYLANDILQNSRRKGSEFVAEFWKFLPEALGEVIENGDEFAKNAALRLVNIWEERKVFGS 143
           LYLANDILQNSRRKGSEFV EFWK LP+AL +V+ENGDEF +NA LRL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVMENGDEFGRNAVLRLIGIWEERKVFGS 120

Query: 142 RGKILKEGIVGRNLENTSKHEKIS------CLKVKQSMGNVLEKITSSYDVVY 2
           RG+ILKE   GR LEN++++ KI+       +K KQS GN LEKI S Y V+Y
Sbjct: 121 RGQILKEEFGGRQLENSNRNGKINTVPYFFSIKQKQSAGNTLEKIVSGYQVIY 173


>ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215983 [Cucumis sativus]
          Length = 528

 Score =  253 bits (647), Expect = 1e-65
 Identities = 124/167 (74%), Positives = 142/167 (85%)
 Frame = -2

Query: 502 MNGTFNPQILVEKLARLNSSQQSIETLSHWCIFHMNKAKQVVETWAKQFHCSPRDQRLSF 323
           M GTFNPQILV+KLARLN+SQ SIETLSHWCIFHMNKAKQVVETW KQFHCSPR+QRL++
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 322 LYLANDILQNSRRKGSEFVAEFWKFLPEALGEVIENGDEFAKNAALRLVNIWEERKVFGS 143
           LYLANDILQNSRRKGSEFV EFWK LP+AL +VI NGDEF +NAALRL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 142 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVY 2
           RG+ LKE I+G++LE  +++ K    K+KQS    L+KI S Y VVY
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVY 167


>ref|XP_002512894.1| conserved hypothetical protein [Ricinus communis]
           gi|223547905|gb|EEF49397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 522

 Score =  253 bits (645), Expect = 2e-65
 Identities = 121/166 (72%), Positives = 144/166 (86%)
 Frame = -2

Query: 502 MNGTFNPQILVEKLARLNSSQQSIETLSHWCIFHMNKAKQVVETWAKQFHCSPRDQRLSF 323
           M  +FNPQIL+EKLA+LN SQ SIETLSHWCIFHMNKAKQVVETW +QFHCSPR+QRL+F
Sbjct: 1   MGSSFNPQILMEKLAKLNHSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF 60

Query: 322 LYLANDILQNSRRKGSEFVAEFWKFLPEALGEVIENGDEFAKNAALRLVNIWEERKVFGS 143
           LYLANDILQNSRRKGSEFV EFWK LPEAL +VIENGDE  +NAALRL++IWE+RKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPEALRDVIENGDEVGRNAALRLISIWEDRKVFGS 120

Query: 142 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVV 5
           RG+ILKE +VG++ EN++++ K   LK+KQ  G+ L+KI S Y V+
Sbjct: 121 RGQILKEELVGKHSENSNRNGKHLGLKLKQPAGSTLDKIISGYQVL 166


>ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Cucumis sativus]
          Length = 528

 Score =  251 bits (641), Expect = 6e-65
 Identities = 122/167 (73%), Positives = 142/167 (85%)
 Frame = -2

Query: 502 MNGTFNPQILVEKLARLNSSQQSIETLSHWCIFHMNKAKQVVETWAKQFHCSPRDQRLSF 323
           M GTFNPQILV+KLARLN+SQ SIE++SHWCIFHMNKAKQVVETW KQFHCSPR+QRL++
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIESISHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 322 LYLANDILQNSRRKGSEFVAEFWKFLPEALGEVIENGDEFAKNAALRLVNIWEERKVFGS 143
           LYLANDILQNSRRKGSEFV EFWK LP+AL +VI NGDEF +NAALRL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 142 RGKILKEGIVGRNLENTSKHEKISCLKVKQSMGNVLEKITSSYDVVY 2
           RG+ LKE I+G++LE  +++ K    K+KQS    L+KI S Y VVY
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVY 167


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