BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018412
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA98183.1| RAB11G [Lotus japonicus]                              213   1e-53
ref|XP_002527386.1| protein with unknown function [Ricinus commu...   212   3e-53
gb|AAA74116.1| putative, partial [Nicotiana tabacum]                  211   4e-53
ref|XP_002301639.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-53
ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana] g...   209   2e-52

>emb|CAA98183.1| RAB11G [Lotus japonicus]
          Length = 219

 Score =  213 bits (543), Expect = 1e-53
 Identities = 111/158 (70%), Positives = 124/158 (78%)
 Frame = +3

Query: 3   WDTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLGELNTHSDTTIAXXXXXX 182
           WDTAGQERFRAVTSAYYRGA+GA IVYDITRRTTFDSV+RWL EL TH DTT+       
Sbjct: 67  WDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTV------- 119

Query: 183 XXXXXXXXXXXXXXHSDTTIARMLVGNKLDLENIRAVSVEEGKSLAEEEGMFFMETSALD 362
                               A MLVGNK DLENIRAVS+EEGKSLAE +G+FFMETSALD
Sbjct: 120 --------------------AMMLVGNKCDLENIRAVSIEEGKSLAEAQGLFFMETSALD 159

Query: 363 STNVRTAFEMVIKDIYNNVSRKVLNSDSYKADVSLNRV 476
           STNVRTAFEMVI++IYNNVSRKVLNSD+YKA++S++RV
Sbjct: 160 STNVRTAFEMVIREIYNNVSRKVLNSDTYKAELSVDRV 197


>ref|XP_002527386.1| protein with unknown function [Ricinus communis]
           gi|223533238|gb|EEF34993.1| protein with unknown
           function [Ricinus communis]
          Length = 218

 Score =  212 bits (539), Expect = 3e-53
 Identities = 111/158 (70%), Positives = 123/158 (77%)
 Frame = +3

Query: 3   WDTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLGELNTHSDTTIAXXXXXX 182
           WDTAGQERFRAVTSAYYRGA+GA IVYDI+RRTTFDSV RWL EL THSDT         
Sbjct: 66  WDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDT--------- 116

Query: 183 XXXXXXXXXXXXXXHSDTTIARMLVGNKLDLENIRAVSVEEGKSLAEEEGMFFMETSALD 362
                             T+ARMLVGNK DLENIR V+VEEGKSLAE EG+FFMETSALD
Sbjct: 117 ------------------TVARMLVGNKCDLENIRDVTVEEGKSLAEAEGLFFMETSALD 158

Query: 363 STNVRTAFEMVIKDIYNNVSRKVLNSDSYKADVSLNRV 476
           STNV+ AFE+VI++IYNNVSRKVLNSD+YKA++SLNRV
Sbjct: 159 STNVKKAFEIVIREIYNNVSRKVLNSDTYKAELSLNRV 196


>gb|AAA74116.1| putative, partial [Nicotiana tabacum]
          Length = 209

 Score =  211 bits (538), Expect = 4e-53
 Identities = 110/158 (69%), Positives = 122/158 (77%)
 Frame = +3

Query: 3   WDTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLGELNTHSDTTIAXXXXXX 182
           WDTAGQERFRAVTSAYYRGA GA +VYDITRRTTFDS+ RWL EL THSDT         
Sbjct: 58  WDTAGQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDT--------- 108

Query: 183 XXXXXXXXXXXXXXHSDTTIARMLVGNKLDLENIRAVSVEEGKSLAEEEGMFFMETSALD 362
                             T+ARMLVGNK DL+NIRAVSVEEGKSLAE EGMFFMETSALD
Sbjct: 109 ------------------TVARMLVGNKCDLDNIRAVSVEEGKSLAESEGMFFMETSALD 150

Query: 363 STNVRTAFEMVIKDIYNNVSRKVLNSDSYKADVSLNRV 476
           +TNV  AF+MVI++IYN+VSRKVLNSDSYKA++S+NRV
Sbjct: 151 ATNVNKAFDMVIREIYNSVSRKVLNSDSYKAELSVNRV 188


>ref|XP_002301639.1| predicted protein [Populus trichocarpa] gi|222843365|gb|EEE80912.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  211 bits (536), Expect = 6e-53
 Identities = 111/158 (70%), Positives = 122/158 (77%)
 Frame = +3

Query: 3   WDTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLGELNTHSDTTIAXXXXXX 182
           WDTAGQERFRAVTSAYYRGA+GA IVYDI+RRTTFDSV RWL EL THSDT         
Sbjct: 66  WDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDT--------- 116

Query: 183 XXXXXXXXXXXXXXHSDTTIARMLVGNKLDLENIRAVSVEEGKSLAEEEGMFFMETSALD 362
                             T+A MLVGNK DLENIR VSVEEGKSLAE EG+FFMETSALD
Sbjct: 117 ------------------TVAMMLVGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALD 158

Query: 363 STNVRTAFEMVIKDIYNNVSRKVLNSDSYKADVSLNRV 476
           STNV+ AFE+VI++IYNNVSRKVLNSD+YKA++SLNRV
Sbjct: 159 STNVKKAFEIVIREIYNNVSRKVLNSDTYKAELSLNRV 196


>ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
           gi|29893534|gb|AAP06819.1| putative RAS-related protein
           ARA-1 [Arabidopsis thaliana] gi|332189776|gb|AEE27897.1|
           RAB GTPase homolog A5E [Arabidopsis thaliana]
          Length = 261

 Score =  209 bits (532), Expect = 2e-52
 Identities = 109/158 (68%), Positives = 122/158 (77%)
 Frame = +3

Query: 3   WDTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLGELNTHSDTTIAXXXXXX 182
           WDTAGQERFRAVTSAYYRGA+GA +VYDITRRTTF+SV RWL EL  HS           
Sbjct: 109 WDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHS----------- 157

Query: 183 XXXXXXXXXXXXXXHSDTTIARMLVGNKLDLENIRAVSVEEGKSLAEEEGMFFMETSALD 362
                           DTT+ARMLVGNK DLENIRAVSVEEGK+LAEEEG+FF+ETSALD
Sbjct: 158 ----------------DTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALD 201

Query: 363 STNVRTAFEMVIKDIYNNVSRKVLNSDSYKADVSLNRV 476
           STNV+TAFEMVI DIYNNVSRK LNSD+YK ++++NRV
Sbjct: 202 STNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRV 239