BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018404
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...    85   1e-14
ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...    85   1e-14
ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arab...    85   1e-14
ref|XP_002514664.1| activating signal cointegrator 1 complex sub...    82   1e-13
ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 ...    81   3e-13

>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332010042|gb|AED97425.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = -3

Query: 186 EMRLRYKSWIDFAQTAFHGYTSLNRI*SRIFRATYHTNVSILVCAPPGAGQKNIAMVTVL 7
           E  +  K   DFAQ AFHGY SLNRI SRIF+  YHTN +ILVCAP GAG+ NIAM++VL
Sbjct: 486 EKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVL 545

Query: 6   HE 1
           HE
Sbjct: 546 HE 547


>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
           thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = -3

Query: 186 EMRLRYKSWIDFAQTAFHGYTSLNRI*SRIFRATYHTNVSILVCAPPGAGQKNIAMVTVL 7
           E  +  K   DFAQ AFHGY SLNRI SRIF+  YHTN +ILVCAP GAG+ NIAM++VL
Sbjct: 486 EKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVL 545

Query: 6   HE 1
           HE
Sbjct: 546 HE 547


>ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
           lyrata] gi|297310552|gb|EFH40976.1| hypothetical protein
           ARALYDRAFT_919354 [Arabidopsis lyrata subsp. lyrata]
          Length = 2112

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = -3

Query: 186 EMRLRYKSWIDFAQTAFHGYTSLNRI*SRIFRATYHTNVSILVCAPPGAGQKNIAMVTVL 7
           E  +  K   DFAQ AFHGY SLNRI SRIF+  YHTN +ILVCAP GAG+ NIAM++VL
Sbjct: 452 EKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVL 511

Query: 6   HE 1
           HE
Sbjct: 512 HE 513


>ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
           [Ricinus communis] gi|223546268|gb|EEF47770.1|
           activating signal cointegrator 1 complex subunit 3,
           helc1, putative [Ricinus communis]
          Length = 2100

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 39/62 (62%), Positives = 47/62 (75%)
 Frame = -3

Query: 186 EMRLRYKSWIDFAQTAFHGYTSLNRI*SRIFRATYHTNVSILVCAPPGAGQKNIAMVTVL 7
           E  +  K   DFAQ AFHGY SLNRI SRIF+  Y+TN +ILVCAP GAG+ NIAM+++L
Sbjct: 423 EKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISIL 482

Query: 6   HE 1
           HE
Sbjct: 483 HE 484


>ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
           [Vitis vinifera] gi|297733882|emb|CBI15129.3| unnamed
           protein product [Vitis vinifera]
          Length = 2093

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 38/62 (61%), Positives = 46/62 (74%)
 Frame = -3

Query: 186 EMRLRYKSWIDFAQTAFHGYTSLNRI*SRIFRATYHTNVSILVCAPPGAGQKNIAMVTVL 7
           E  +  K   DFAQ AFHGY SLNRI SRIF+  Y+TN ++LVCAP GAG+ NIAM+ +L
Sbjct: 419 EKLIDIKELDDFAQAAFHGYKSLNRIQSRIFQTVYYTNENVLVCAPTGAGKTNIAMIAIL 478

Query: 6   HE 1
           HE
Sbjct: 479 HE 480