BLASTX nr result

ID: Coptis25_contig00018399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018399
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23585.3| unnamed protein product [Vitis vinifera]              759   0.0  
ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vit...   757   0.0  
ref|XP_002529309.1| conserved hypothetical protein [Ricinus comm...   719   0.0  
ref|XP_004170299.1| PREDICTED: actin-related protein 9-like, par...   702   0.0  
ref|XP_004134078.1| PREDICTED: actin-related protein 9-like [Cuc...   696   0.0  

>emb|CBI23585.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score =  759 bits (1960), Expect = 0.0
 Identities = 361/499 (72%), Positives = 423/499 (84%), Gaps = 3/499 (0%)
 Frame = -3

Query: 1488 MEYLKSVVPSQLMAERGGNLVLINPGSANIRMGLAPQQAPFTIPHCIARFISVENQ--GQ 1315
            M+YLKSVVPSQL+AERG NLV+INPGSANIR+GLA Q+ PF +PHC+AR+ +V NQ   +
Sbjct: 38   MDYLKSVVPSQLVAERGSNLVVINPGSANIRIGLAQQETPFNVPHCVARYTTVGNQVPKR 97

Query: 1314 TLQDQMLNSQVTPAQKIERDKAYNIIASLVKIPFLNEEVANNSIPRKTVRVDGLKPQNSR 1135
             +QDQMLNSQ+T AQ +ER+KAY+IIASL+KIPFL+EEVANNS PRK  RVDG  P N+R
Sbjct: 98   HVQDQMLNSQITTAQHMEREKAYDIIASLLKIPFLDEEVANNSFPRKMARVDGYNPPNTR 157

Query: 1134 NDSTFSWTNVMEKNQNTSVEIEKSEKKDVKGESVDQLKGSD-GEPNSGAYKFREYICGEE 958
             D+ FSW N+ EK  ++S+  E  E K    ES+DQ + +D  E +S   K+R++ICGEE
Sbjct: 158  KDTAFSWANIFEKKPDSSLASESLENKGANMESIDQHESNDCKEASSSECKYRQFICGEE 217

Query: 957  AMRIPPSKPYCLRRPIRRGHLNISQHYSMQQVFDDLYTIWDWILNEKLHIPQAGRNMYSA 778
            A+RI P++PYCLRRPIRRGH N+SQHY MQQV +DL+TIWDW+L EKLHIP   RNMYSA
Sbjct: 218  ALRISPNEPYCLRRPIRRGHFNVSQHYPMQQVLEDLFTIWDWVLIEKLHIPHCERNMYSA 277

Query: 777  VLIVPETFDTREIKELLSLILRDLRFSSAVVHQEGLAAVFGNGLSTACVVNMGAQMTSII 598
            +L+VPETFD REIKE+LS++LRDL FSSAVVHQEGLAAVFGNGLSTACVVNMGAQ+TS+I
Sbjct: 278  ILVVPETFDNREIKEMLSIVLRDLCFSSAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVI 337

Query: 597  CVEDGVALPTTGVNLPFGGEDISRCLLWSQRHHQTWPPIYTDPLLKPIDLLMLNKLKESY 418
            C+EDGVALP+T + LPFGGEDISRCLLW+QRHHQTWPPI TD L KPIDLLMLNKLKESY
Sbjct: 338  CIEDGVALPSTQMTLPFGGEDISRCLLWTQRHHQTWPPIRTDALTKPIDLLMLNKLKESY 397

Query: 417  CQIREGEVDAVALVHSYEDNMPTGVHKTRLTALNVPPMGVFYPRLLVPDEHPPPARFWFR 238
            CQI+EGE+D VA+VHSYE+  P G HKTRLTALNVPPMG+FYP LLVPD +PPP R WF 
Sbjct: 398  CQIKEGELDVVAVVHSYENGTPAGSHKTRLTALNVPPMGLFYPMLLVPDVYPPPPRSWFH 457

Query: 237  DYEDMLEDTWHMEFPRRPDMPDGLFLNANGGLSMWDNYPVLPTRLKKDDNLGLAEAITSS 58
            DYEDM EDTWH+EFPRR DM DGLF   NGGLSMWDN+PV PT+ K+++ +GLAEAITSS
Sbjct: 458  DYEDMPEDTWHIEFPRRTDMSDGLFAGVNGGLSMWDNFPVFPTKPKREEKVGLAEAITSS 517

Query: 57   ILSTGRIDLQRKLFCSIHL 1
            ILSTGRIDLQRKLFCS+ L
Sbjct: 518  ILSTGRIDLQRKLFCSMQL 536


>ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vitis vinifera]
          Length = 602

 Score =  757 bits (1955), Expect = 0.0
 Identities = 360/498 (72%), Positives = 422/498 (84%), Gaps = 3/498 (0%)
 Frame = -3

Query: 1485 EYLKSVVPSQLMAERGGNLVLINPGSANIRMGLAPQQAPFTIPHCIARFISVENQ--GQT 1312
            +YLKSVVPSQL+AERG NLV+INPGSANIR+GLA Q+ PF +PHC+AR+ +V NQ   + 
Sbjct: 9    DYLKSVVPSQLVAERGSNLVVINPGSANIRIGLAQQETPFNVPHCVARYTTVGNQVPKRH 68

Query: 1311 LQDQMLNSQVTPAQKIERDKAYNIIASLVKIPFLNEEVANNSIPRKTVRVDGLKPQNSRN 1132
            +QDQMLNSQ+T AQ +ER+KAY+IIASL+KIPFL+EEVANNS PRK  RVDG  P N+R 
Sbjct: 69   VQDQMLNSQITTAQHMEREKAYDIIASLLKIPFLDEEVANNSFPRKMARVDGYNPPNTRK 128

Query: 1131 DSTFSWTNVMEKNQNTSVEIEKSEKKDVKGESVDQLKGSD-GEPNSGAYKFREYICGEEA 955
            D+ FSW N+ EK  ++S+  E  E K    ES+DQ + +D  E +S   K+R++ICGEEA
Sbjct: 129  DTAFSWANIFEKKPDSSLASESLENKGANMESIDQHESNDCKEASSSECKYRQFICGEEA 188

Query: 954  MRIPPSKPYCLRRPIRRGHLNISQHYSMQQVFDDLYTIWDWILNEKLHIPQAGRNMYSAV 775
            +RI P++PYCLRRPIRRGH N+SQHY MQQV +DL+TIWDW+L EKLHIP   RNMYSA+
Sbjct: 189  LRISPNEPYCLRRPIRRGHFNVSQHYPMQQVLEDLFTIWDWVLIEKLHIPHCERNMYSAI 248

Query: 774  LIVPETFDTREIKELLSLILRDLRFSSAVVHQEGLAAVFGNGLSTACVVNMGAQMTSIIC 595
            L+VPETFD REIKE+LS++LRDL FSSAVVHQEGLAAVFGNGLSTACVVNMGAQ+TS+IC
Sbjct: 249  LVVPETFDNREIKEMLSIVLRDLCFSSAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVIC 308

Query: 594  VEDGVALPTTGVNLPFGGEDISRCLLWSQRHHQTWPPIYTDPLLKPIDLLMLNKLKESYC 415
            +EDGVALP+T + LPFGGEDISRCLLW+QRHHQTWPPI TD L KPIDLLMLNKLKESYC
Sbjct: 309  IEDGVALPSTQMTLPFGGEDISRCLLWTQRHHQTWPPIRTDALTKPIDLLMLNKLKESYC 368

Query: 414  QIREGEVDAVALVHSYEDNMPTGVHKTRLTALNVPPMGVFYPRLLVPDEHPPPARFWFRD 235
            QI+EGE+D VA+VHSYE+  P G HKTRLTALNVPPMG+FYP LLVPD +PPP R WF D
Sbjct: 369  QIKEGELDVVAVVHSYENGTPAGSHKTRLTALNVPPMGLFYPMLLVPDVYPPPPRSWFHD 428

Query: 234  YEDMLEDTWHMEFPRRPDMPDGLFLNANGGLSMWDNYPVLPTRLKKDDNLGLAEAITSSI 55
            YEDM EDTWH+EFPRR DM DGLF   NGGLSMWDN+PV PT+ K+++ +GLAEAITSSI
Sbjct: 429  YEDMPEDTWHIEFPRRTDMSDGLFAGVNGGLSMWDNFPVFPTKPKREEKVGLAEAITSSI 488

Query: 54   LSTGRIDLQRKLFCSIHL 1
            LSTGRIDLQRKLFCS+ L
Sbjct: 489  LSTGRIDLQRKLFCSMQL 506


>ref|XP_002529309.1| conserved hypothetical protein [Ricinus communis]
            gi|223531233|gb|EEF33078.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 589

 Score =  719 bits (1856), Expect = 0.0
 Identities = 344/496 (69%), Positives = 419/496 (84%)
 Frame = -3

Query: 1488 MEYLKSVVPSQLMAERGGNLVLINPGSANIRMGLAPQQAPFTIPHCIARFISVENQGQTL 1309
            M+YLK+VVPSQL+AERG NLV+INPGSA++R+GLAPQ  PF +PHCIAR+ S ++    +
Sbjct: 1    MDYLKTVVPSQLVAERGSNLVVINPGSASVRIGLAPQDTPFNVPHCIARYSS-QSPKLNV 59

Query: 1308 QDQMLNSQVTPAQKIERDKAYNIIASLVKIPFLNEEVANNSIPRKTVRVDGLKPQNSRND 1129
            +DQMLNSQVT AQ +ER+KAY+IIAS +KIPFL+EEVANNS PRK  RVDG  PQ+ R D
Sbjct: 60   RDQMLNSQVTTAQHMEREKAYDIIASYLKIPFLDEEVANNSFPRKIGRVDGFNPQSGRKD 119

Query: 1128 STFSWTNVMEKNQNTSVEIEKSEKKDVKGESVDQLKGSDGEPNSGAYKFREYICGEEAMR 949
              F+WTNV E++ ++S+  E+   +   G S+++L+ +D +  S + K+R +ICGEEA++
Sbjct: 120  VAFTWTNVYEQDTSSSLASERPTNEGQIGGSLEKLESTDAKGPSTS-KYRGFICGEEALQ 178

Query: 948  IPPSKPYCLRRPIRRGHLNISQHYSMQQVFDDLYTIWDWILNEKLHIPQAGRNMYSAVLI 769
            I P++PYCL RPIRRGHLNISQHY MQQV +DL+ IWDWIL EKLHIPQ+ RNMY+A+L+
Sbjct: 179  ISPTEPYCLHRPIRRGHLNISQHYPMQQVLEDLHAIWDWILIEKLHIPQSERNMYAAILV 238

Query: 768  VPETFDTREIKELLSLILRDLRFSSAVVHQEGLAAVFGNGLSTACVVNMGAQMTSIICVE 589
            +PETFD REIKE++S++LRDLRFSSAVVHQEGLAAVFGNGLSTACV+N+GAQ+TS+IC+E
Sbjct: 239  LPETFDNREIKEMISIVLRDLRFSSAVVHQEGLAAVFGNGLSTACVINIGAQVTSVICIE 298

Query: 588  DGVALPTTGVNLPFGGEDISRCLLWSQRHHQTWPPIYTDPLLKPIDLLMLNKLKESYCQI 409
            DGVALP T   LPFGGED+SRCLLW+QRHHQTWP I TD L KP+DLLMLN+L+ESYC+I
Sbjct: 299  DGVALPNTEKTLPFGGEDLSRCLLWTQRHHQTWPQIRTDILTKPLDLLMLNRLRESYCEI 358

Query: 408  REGEVDAVALVHSYEDNMPTGVHKTRLTALNVPPMGVFYPRLLVPDEHPPPARFWFRDYE 229
            +EGEVDAVA+V SYED MP G HKTRL ALNVPPMG+FYP LLVPD +PPP R WF DYE
Sbjct: 359  KEGEVDAVAVVQSYEDGMPAGSHKTRLNALNVPPMGLFYPMLLVPDVYPPPPRSWFHDYE 418

Query: 228  DMLEDTWHMEFPRRPDMPDGLFLNANGGLSMWDNYPVLPTRLKKDDNLGLAEAITSSILS 49
            DMLEDTWH+E+PRRPDM DGLF  A  GL MWD+YPV  ++ KK++ +GLAEAITSSILS
Sbjct: 419  DMLEDTWHVEYPRRPDMSDGLF-PAFSGLPMWDSYPVFASKPKKEEKVGLAEAITSSILS 477

Query: 48   TGRIDLQRKLFCSIHL 1
            TGRIDL+RKLFCSI L
Sbjct: 478  TGRIDLKRKLFCSIQL 493


>ref|XP_004170299.1| PREDICTED: actin-related protein 9-like, partial [Cucumis sativus]
          Length = 512

 Score =  702 bits (1813), Expect = 0.0
 Identities = 336/497 (67%), Positives = 407/497 (81%), Gaps = 1/497 (0%)
 Frame = -3

Query: 1488 MEYLKSVVPSQLMAERGGNLVLINPGSANIRMGLAPQQAPFTIPHCIARFISVENQGQTL 1309
            M+YLKSVVPSQL+AERG NLV+INPGSANIR+GLA Q APF +PHCIAR+ + +   + +
Sbjct: 1    MDYLKSVVPSQLIAERGSNLVVINPGSANIRIGLASQDAPFNVPHCIARYTN-QVPKRNV 59

Query: 1308 QDQMLNSQVTPAQKIERDKAYNIIASLVKIPFLNEEVANNSIPRKTVRVDGLKPQNSRND 1129
            QDQMLNSQVT AQ +ER++AY++IASL+KIPFL+EEVAN+S PRK  RVDG    N + D
Sbjct: 60   QDQMLNSQVTTAQHMERERAYDVIASLLKIPFLDEEVANSSFPRKMGRVDGHGMHNGKKD 119

Query: 1128 STFSWTNVMEKNQNTSVEIEKSEKKDVKGESVDQLKGSDG-EPNSGAYKFREYICGEEAM 952
            + FSWT+V E++  + V +E S  KDV  E +DQ   +D  E  S   K+R++ICGE+A+
Sbjct: 120  TVFSWTDVHERDPTSPVAVESSSSKDVNHEPLDQRVDTDSKELTSSIIKYRQFICGEDAL 179

Query: 951  RIPPSKPYCLRRPIRRGHLNISQHYSMQQVFDDLYTIWDWILNEKLHIPQAGRNMYSAVL 772
            +I PS+PYCL RPIRRGHLNISQHY  QQV +DL+ IWDWIL EKLHIP + RN YSA+L
Sbjct: 180  KISPSEPYCLHRPIRRGHLNISQHYPTQQVLEDLHAIWDWILIEKLHIPHSERNFYSAIL 239

Query: 771  IVPETFDTREIKELLSLILRDLRFSSAVVHQEGLAAVFGNGLSTACVVNMGAQMTSIICV 592
            +VPETFD REIKE+L+++LRDLRF SAVVHQEGLAAVFGNGLS+ACVVN+G+Q+T++IC+
Sbjct: 240  VVPETFDNREIKEMLTIVLRDLRFGSAVVHQEGLAAVFGNGLSSACVVNVGSQVTTVICI 299

Query: 591  EDGVALPTTGVNLPFGGEDISRCLLWSQRHHQTWPPIYTDPLLKPIDLLMLNKLKESYCQ 412
            EDGVALP T   LPFGGED+SRCLLW+QRHHQTWPPI TD L KP+DLLMLN+LKESYC+
Sbjct: 300  EDGVALPATAKTLPFGGEDLSRCLLWTQRHHQTWPPICTDILSKPVDLLMLNRLKESYCE 359

Query: 411  IREGEVDAVALVHSYEDNMPTGVHKTRLTALNVPPMGVFYPRLLVPDEHPPPARFWFRDY 232
            IREGEVDAVA+VHSYE+  P   HKTRLTALNVPPMG+F+P LLVPD +PPP R WF DY
Sbjct: 360  IREGEVDAVAVVHSYEEGTPPSSHKTRLTALNVPPMGLFFPMLLVPDVYPPPPRAWFHDY 419

Query: 231  EDMLEDTWHMEFPRRPDMPDGLFLNANGGLSMWDNYPVLPTRLKKDDNLGLAEAITSSIL 52
            EDMLE+TW  E+ +RPD+PD ++   N    MWD+YPV  T+ KK++ +GLAEAITSSIL
Sbjct: 420  EDMLEETWQTEYSKRPDVPDNVYPGVNVNYPMWDSYPVYATKPKKEEKVGLAEAITSSIL 479

Query: 51   STGRIDLQRKLFCSIHL 1
             TGRIDLQRKLF SI L
Sbjct: 480  LTGRIDLQRKLFLSIQL 496


>ref|XP_004134078.1| PREDICTED: actin-related protein 9-like [Cucumis sativus]
          Length = 599

 Score =  696 bits (1795), Expect = 0.0
 Identities = 336/504 (66%), Positives = 407/504 (80%), Gaps = 8/504 (1%)
 Frame = -3

Query: 1488 MEYLKSVVPSQLMAERGGNLVLINPGSANIRMGLAPQQAPFTIPHCIARFISVENQGQTL 1309
            M+YLKSVVPSQL+AERG NLV+INPGSANIR+GLA Q APF +PHCIAR+ + +   + +
Sbjct: 1    MDYLKSVVPSQLIAERGSNLVVINPGSANIRIGLASQDAPFNVPHCIARYTN-QVPKRNV 59

Query: 1308 QDQMLNSQVTPAQKIERDKAYNIIASLVKIPFLNEEVANNSIPRKTVRVDGLKPQNSRND 1129
            QDQMLNSQVT AQ +ER++AY++IASL+KIPFL+EEVAN+S PRK  RVDG    N + D
Sbjct: 60   QDQMLNSQVTTAQHMERERAYDVIASLLKIPFLDEEVANSSFPRKMGRVDGHGMHNGKKD 119

Query: 1128 STFSWTNVMEKNQNTSVEIEKSEKKDVKGESVDQLKGSDG-EPNSGAYKFREYICGEEAM 952
            + FSWT+V E++  + V +E S  KDV  E +DQ   +D  E  S   K+R++ICGE+A+
Sbjct: 120  TVFSWTDVHERDPTSPVAVESSSSKDVNHEPLDQRVDTDSKELTSSIIKYRQFICGEDAL 179

Query: 951  RIPPSKPYCLRRPIRRGHLNISQHYSMQQVFDDLYTIWDWILNEKLHIPQAGRNMYSAVL 772
            +I PS+PYCL RPIRRGHLNISQHY  QQV +DL+ IWDWIL EKLHIP + RN YSA+L
Sbjct: 180  KISPSEPYCLHRPIRRGHLNISQHYPTQQVLEDLHAIWDWILIEKLHIPHSERNFYSAIL 239

Query: 771  IVPETFDTREIKELLSLILRDLRFSSAVVHQEGLAAVFGNGLSTACVVNMGAQMTSIICV 592
            +VPETFD REIKE+L+++LRDLRF SAVVHQEGLAAVFGNGLS+ACVVN+G+Q+T++IC+
Sbjct: 240  VVPETFDNREIKEMLTIVLRDLRFGSAVVHQEGLAAVFGNGLSSACVVNVGSQVTTVICI 299

Query: 591  EDGVALPTTGVNLPFGGEDISRCLLWSQRHHQTWPPIYTDPLLKP-------IDLLMLNK 433
            EDGVALP T   LPFGGED+SRCLLW+QRHHQTWPPI TD L KP       +DLLMLN+
Sbjct: 300  EDGVALPATAKTLPFGGEDLSRCLLWTQRHHQTWPPICTDILSKPVDLLMLTVDLLMLNR 359

Query: 432  LKESYCQIREGEVDAVALVHSYEDNMPTGVHKTRLTALNVPPMGVFYPRLLVPDEHPPPA 253
            LKESYC+IREGEVDAVA+VHSYE+  P   HKTRLTALNVPPMG+F+P LLVPD +PPP 
Sbjct: 360  LKESYCEIREGEVDAVAVVHSYEEGTPPSSHKTRLTALNVPPMGLFFPMLLVPDVYPPPP 419

Query: 252  RFWFRDYEDMLEDTWHMEFPRRPDMPDGLFLNANGGLSMWDNYPVLPTRLKKDDNLGLAE 73
            R WF DYEDMLE+TW  E+ +RPD+PD ++   N    MWD+YPV  T+ KK++ +GLAE
Sbjct: 420  RAWFHDYEDMLEETWQTEYSKRPDVPDNVYPGVNVNYPMWDSYPVYATKPKKEEKVGLAE 479

Query: 72   AITSSILSTGRIDLQRKLFCSIHL 1
            AITSSIL TGRIDLQRKLF SI L
Sbjct: 480  AITSSILLTGRIDLQRKLFLSIQL 503


Top