BLASTX nr result

ID: Coptis25_contig00018394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018394
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus comm...   273   8e-71
ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816...   259   1e-66
ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-64
ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783...   252   1e-64
ref|XP_003622869.1| GTP cyclohydrolase I [Medicago truncatula] g...   245   2e-62

>ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus communis]
            gi|223529330|gb|EEF31298.1| GTP cyclohydrolase I,
            putative [Ricinus communis]
          Length = 469

 Score =  273 bits (698), Expect = 8e-71
 Identities = 132/203 (65%), Positives = 163/203 (80%)
 Frame = -2

Query: 1196 MITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNGFGAEATCQIKSRKQ 1017
            M++AV  IL S+GE+P RKELVGTP RFV+WLMNF ++NLEM LNGFG      +K+   
Sbjct: 273  MVSAVTSILTSIGEDPLRKELVGTPSRFVKWLMNFHNTNLEMKLNGFGCNRMDPLKANGG 332

Query: 1016 MNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTEGIEPIGRAILQSIV 837
            ++ +       + + +SELNL FWSQCEHHLLPF+GVVHIGYF+ EG  PIG+++LQSIV
Sbjct: 333  VSHN-------KEQLQSELNLSFWSQCEHHLLPFYGVVHIGYFQAEGFNPIGKSLLQSIV 385

Query: 836  HFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIEKVGSSTATIATLGR 657
            HF+G+KLQVQERLTRQI ET SS+ GG+VM VVEANH CMISRGIEK GS+TATIA LGR
Sbjct: 386  HFYGFKLQVQERLTRQIAETASSILGGNVMVVVEANHTCMISRGIEKFGSNTATIAVLGR 445

Query: 656  FSTDPSAKELFLQTVSDSTACGG 588
            FSTDPS++ +FLQ++ +S ACGG
Sbjct: 446  FSTDPSSRAMFLQSIPNSAACGG 468


>ref|XP_003530850.1| PREDICTED: uncharacterized protein LOC100816351 [Glycine max]
          Length = 457

 Score =  259 bits (661), Expect = 1e-66
 Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 5/262 (1%)
 Frame = -2

Query: 1361 KFRGVKLDKLRNGXXXXXXXXXXXSLDLLAINGHTNN-WNP----LSYKTSITAEPAPAS 1197
            KFRG+ +DK+                    + G ++  W P    LS K S    P    
Sbjct: 221  KFRGINMDKIH-------------------LRGSSDPCWCPSQSSLSAKVSSKIGPVNPV 261

Query: 1196 MITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNGFGAEATCQIKSRKQ 1017
            M+TAVA I+ SLGE+P RKEL+GTP RFV+WLMNF++SN +M LNGF  +    + + ++
Sbjct: 262  MVTAVASIIESLGEDPLRKELIGTPSRFVKWLMNFQNSNFDMKLNGFLCDGIDSLNANEE 321

Query: 1016 MNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTEGIEPIGRAILQSIV 837
            +N +         +  SELN+PFWSQCEHHLLPFHGVVHIGY  ++G  P+G+ +LQSIV
Sbjct: 322  VNVNQ--------KITSELNIPFWSQCEHHLLPFHGVVHIGYLMSDGFNPMGKLLLQSIV 373

Query: 836  HFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIEKVGSSTATIATLGR 657
            HF+G+KLQVQERLTRQI ET++ + GGDV+ VVEA+H CMISRGIEK GSSTATIA LG 
Sbjct: 374  HFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGH 433

Query: 656  FSTDPSAKELFLQTVSDSTACG 591
            FST+P+A+  FL+++   T+ G
Sbjct: 434  FSTNPTARASFLESIPRPTSSG 455


>ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|222861392|gb|EEE98934.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  253 bits (645), Expect = 1e-64
 Identities = 137/258 (53%), Positives = 168/258 (65%), Gaps = 1/258 (0%)
 Frame = -2

Query: 1361 KFRGVKLDKLRNGXXXXXXXXXXXSLDLLAINGHTNNWNPLSYKTSITA-EPAPASMITA 1185
            KFRG+ LDK +                          W P  Y +S     P    M+TA
Sbjct: 232  KFRGINLDKTQMKDSVQQC------------------WCPSRYSSSAKVIGPPNRGMVTA 273

Query: 1184 VAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNGFGAEATCQIKSRKQMNKD 1005
            V  IL SLGE+P RKELVGTP RFV+WLMNF+S NLEM LNG        +K   +++ +
Sbjct: 274  VTSILSSLGEDPLRKELVGTPSRFVKWLMNFQSPNLEMKLNGVACGRMDPLKQNGEVSHN 333

Query: 1004 GVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTEGIEPIGRAILQSIVHFHG 825
                   + +  +EL L FWSQCEHHLLPF+GVVHIGY+  E   P+ +++LQSIVHF+G
Sbjct: 334  -------KQQIYTELCLSFWSQCEHHLLPFYGVVHIGYYCAEETTPLSKSLLQSIVHFYG 386

Query: 824  WKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIEKVGSSTATIATLGRFSTD 645
            +KLQVQERLTRQI ETVSS+ GGDVM VVEANH CMISRGIEK GSSTATIA LGRFSTD
Sbjct: 387  FKLQVQERLTRQIAETVSSLLGGDVMVVVEANHTCMISRGIEKFGSSTATIAVLGRFSTD 446

Query: 644  PSAKELFLQTVSDSTACG 591
            P+A+ +FL+ + +  + G
Sbjct: 447  PAARAMFLKNIPNPASGG 464


>ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783814 [Glycine max]
          Length = 467

 Score =  252 bits (644), Expect = 1e-64
 Identities = 134/262 (51%), Positives = 171/262 (65%), Gaps = 5/262 (1%)
 Frame = -2

Query: 1361 KFRGVKLDKLRNGXXXXXXXXXXXSLDLLAINGHTNN-WNP----LSYKTSITAEPAPAS 1197
            KFRG+ +DK+                      G ++  W P    LS K S    P    
Sbjct: 231  KFRGINMDKIH-------------------FRGSSDPCWCPSQSSLSAKVSSKIGPVNPV 271

Query: 1196 MITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNGFGAEATCQIKSRKQ 1017
            M+TAVA ++ SLGENP RKEL+GTP RFV+WLMNF+ SN  + LNGF  +    +   + 
Sbjct: 272  MVTAVASVIESLGENPLRKELIGTPTRFVKWLMNFQKSNFNIKLNGFLCDGIDSLNVNED 331

Query: 1016 MNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTEGIEPIGRAILQSIV 837
            +N +         +  SELN+PFWSQCEHHLLPFHGVVHIGY  ++G  PI +++LQSIV
Sbjct: 332  VNINK--------KITSELNIPFWSQCEHHLLPFHGVVHIGYLMSDGFNPILKSLLQSIV 383

Query: 836  HFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIEKVGSSTATIATLGR 657
            HF+G+KLQVQERLTRQI ET++ + GGDV+ VVEA+H CMISRGIEK GSSTATI  LG 
Sbjct: 384  HFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIGVLGH 443

Query: 656  FSTDPSAKELFLQTVSDSTACG 591
            FSTDP+A+  FL+++   T+ G
Sbjct: 444  FSTDPTARASFLKSIPYPTSSG 465


>ref|XP_003622869.1| GTP cyclohydrolase I [Medicago truncatula]
            gi|355497884|gb|AES79087.1| GTP cyclohydrolase I
            [Medicago truncatula]
          Length = 456

 Score =  245 bits (626), Expect = 2e-62
 Identities = 124/214 (57%), Positives = 155/214 (72%)
 Frame = -2

Query: 1238 SYKTSITAEPAPASMITAVAIILLSLGENPSRKELVGTPRRFVQWLMNFKSSNLEMNLNG 1059
            S K S    P   +M+TA A I+ SLGE+P RKEL GTP RFV+WLMNF++ N +M LNG
Sbjct: 247  SAKISSKVGPVNPAMVTAAASIIKSLGEDPLRKELRGTPTRFVKWLMNFQNCNFDMKLNG 306

Query: 1058 FGAEATCQIKSRKQMNKDGVRLRSDRVEFRSELNLPFWSQCEHHLLPFHGVVHIGYFRTE 879
            F       + + K++  +  ++ S       ELNL FWSQCEHHLLPFHGVVHIGY  ++
Sbjct: 307  FLNGGIASLDTNKEVELNDKKICS-------ELNLAFWSQCEHHLLPFHGVVHIGYILSD 359

Query: 878  GIEPIGRAILQSIVHFHGWKLQVQERLTRQIVETVSSVFGGDVMAVVEANHICMISRGIE 699
            G  PIG+++LQSIVHF+G+KLQVQERLTRQI ET+S + GGDV+ VVEA+H CMISRGIE
Sbjct: 360  GFSPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLIGGDVIVVVEASHTCMISRGIE 419

Query: 698  KVGSSTATIATLGRFSTDPSAKELFLQTVSDSTA 597
            K GSSTATIA LG+FSTD + +  FLQ +   T+
Sbjct: 420  KFGSSTATIAVLGQFSTDLTTRASFLQGIPSPTS 453


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