BLASTX nr result

ID: Coptis25_contig00018385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018385
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15188.3| unnamed protein product [Vitis vinifera]              150   9e-35
ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vit...   150   9e-35
ref|XP_002514723.1| vesicle transport V-snare protein vti1a, put...   150   1e-34
dbj|BAK02128.1| predicted protein [Hordeum vulgare subsp. vulgare]    148   4e-34
ref|XP_002456230.1| hypothetical protein SORBIDRAFT_03g032510 [S...   148   4e-34

>emb|CBI15188.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  150 bits (380), Expect = 9e-35
 Identities = 80/107 (74%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   VSADQKGRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHG 181
           VSADQK RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHG
Sbjct: 173 VSADQKTRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHG 232

Query: 182 VDDYIGKSKKVLTAMSRRMTRNKWXXXXXXXXXXXXXXXXXYFKLLH 322
           VDD I KSKK+LTAMSRRM+RNKW                 YFKL H
Sbjct: 233 VDDNISKSKKILTAMSRRMSRNKWIIGSVIAALVLAIILILYFKLAH 279


>ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vitis vinifera]
          Length = 221

 Score =  150 bits (380), Expect = 9e-35
 Identities = 80/107 (74%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   VSADQKGRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHG 181
           VSADQK RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHG
Sbjct: 115 VSADQKTRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHG 174

Query: 182 VDDYIGKSKKVLTAMSRRMTRNKWXXXXXXXXXXXXXXXXXYFKLLH 322
           VDD I KSKK+LTAMSRRM+RNKW                 YFKL H
Sbjct: 175 VDDNISKSKKILTAMSRRMSRNKWIIGSVIAALVLAIILILYFKLAH 221


>ref|XP_002514723.1| vesicle transport V-snare protein vti1a, putative [Ricinus
           communis] gi|223546327|gb|EEF47829.1| vesicle transport
           V-snare protein vti1a, putative [Ricinus communis]
          Length = 221

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/105 (74%), Positives = 84/105 (80%)
 Frame = +2

Query: 2   VSADQKGRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHG 181
           VSADQ+GRLLMSTERLNQS+DRIKESRRTMLETEELGVS+LQDLH QRQ+LLHA NTL G
Sbjct: 115 VSADQRGRLLMSTERLNQSTDRIKESRRTMLETEELGVSVLQDLHQQRQALLHAHNTLQG 174

Query: 182 VDDYIGKSKKVLTAMSRRMTRNKWXXXXXXXXXXXXXXXXXYFKL 316
           VDD IG+SKKVLTAMSRRM+RNKW                 YFKL
Sbjct: 175 VDDNIGRSKKVLTAMSRRMSRNKWIIGSLIALLVFAILLILYFKL 219


>dbj|BAK02128.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 221

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/107 (70%), Positives = 83/107 (77%)
 Frame = +2

Query: 2   VSADQKGRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHG 181
           VS DQ+GRL+M+TERLNQS+DRIKESRRTMLETEELGVSILQDLH QRQSLLHA +TLHG
Sbjct: 115 VSTDQRGRLMMTTERLNQSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHDTLHG 174

Query: 182 VDDYIGKSKKVLTAMSRRMTRNKWXXXXXXXXXXXXXXXXXYFKLLH 322
           VDD +GKSKK+L AMS+RM RNKW                 YFKL H
Sbjct: 175 VDDNVGKSKKILAAMSKRMDRNKWIIGGIISTLVVAILIILYFKLAH 221


>ref|XP_002456230.1| hypothetical protein SORBIDRAFT_03g032510 [Sorghum bicolor]
           gi|241928205|gb|EES01350.1| hypothetical protein
           SORBIDRAFT_03g032510 [Sorghum bicolor]
          Length = 221

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/107 (71%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   VSADQKGRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHG 181
           VS DQ+GRL+M+TERLNQS+DRIKESRRTMLETEELGVSILQDLH QRQSLLHA  TLHG
Sbjct: 115 VSTDQRGRLMMTTERLNQSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHTTLHG 174

Query: 182 VDDYIGKSKKVLTAMSRRMTRNKWXXXXXXXXXXXXXXXXXYFKLLH 322
           VDD IGKSKK+L AMS+RM RNKW                 YFKL H
Sbjct: 175 VDDNIGKSKKILAAMSKRMDRNKWIIGGIITALVLAILLILYFKLAH 221


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