BLASTX nr result

ID: Coptis25_contig00018376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018376
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523034.1| conserved hypothetical protein [Ricinus comm...    83   6e-15
ref|XP_002533662.1| conserved hypothetical protein [Ricinus comm...    80   9e-14
ref|XP_002282487.1| PREDICTED: uncharacterized protein LOC100267...    79   9e-14
ref|XP_002282451.1| PREDICTED: uncharacterized protein LOC100244...    82   2e-13
ref|XP_004147706.1| PREDICTED: uncharacterized protein LOC101203...    82   2e-13

>ref|XP_002523034.1| conserved hypothetical protein [Ricinus communis]
           gi|223537717|gb|EEF39338.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score = 82.8 bits (203), Expect(2) = 6e-15
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -3

Query: 779 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRT 642
           MGDSSASYI MVQHLIEKCL+FHM ++ECM+ALSKHANI PVIT T
Sbjct: 1   MGDSSASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITST 46



 Score = 24.6 bits (52), Expect(2) = 6e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 552 ATVWXXXXXXXXXXXEAYKKINR-EDQMSEAETTQKILQIL 433
           +TVW           EAY +  R +D+MSE ET+Q I +++
Sbjct: 45  STVWNELEKENKEFFEAYIESKRKDDRMSEEETSQMIQKMI 85


>ref|XP_002533662.1| conserved hypothetical protein [Ricinus communis]
           gi|223526444|gb|EEF28721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 80.5 bits (197), Expect(2) = 9e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = -3

Query: 779 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRT 642
           MGDSSASYIRMVQHLIE+CL+F M ++ECM+ALSKHANI PVIT T
Sbjct: 1   MGDSSASYIRMVQHLIERCLIFRMTKEECMEALSKHANITPVITST 46



 Score = 23.1 bits (48), Expect(2) = 9e-14
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 552 ATVWXXXXXXXXXXXEAYKKI-NREDQMSEAETTQKILQIL 433
           +TVW           E Y +  +++D+MS+ ETTQ I +++
Sbjct: 45  STVWNELEKENKEFFEVYAQSKSKDDRMSDEETTQMIQKMV 85


>ref|XP_002282487.1| PREDICTED: uncharacterized protein LOC100267224 [Vitis vinifera]
           gi|296086933|emb|CBI33166.3| unnamed protein product
           [Vitis vinifera]
          Length = 93

 Score = 78.6 bits (192), Expect(2) = 9e-14
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 779 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRT 642
           MGDSSASYI MVQHLIEKCL+FHM+++ECM+ALSKHA+I  VIT T
Sbjct: 1   MGDSSASYIHMVQHLIEKCLIFHMSKEECMEALSKHADINQVITST 46



 Score = 25.0 bits (53), Expect(2) = 9e-14
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 552 ATVWXXXXXXXXXXXEAY--KKINREDQMSEAETTQKILQIL 433
           +TVW           EAY  +   R+D+MSEAET + I +++
Sbjct: 45  STVWNELEKENKEFFEAYHTQTQTRDDRMSEAETNEMIQKMI 86


>ref|XP_002282451.1| PREDICTED: uncharacterized protein LOC100244913 [Vitis vinifera]
           gi|296086934|emb|CBI33167.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -3

Query: 779 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRT 642
           MGDSSASYI MVQHLIE CL+FHM+++ECM+ALSKHANI+PVIT T
Sbjct: 1   MGDSSASYIHMVQHLIENCLIFHMSKEECMEALSKHANIEPVITST 46


>ref|XP_004147706.1| PREDICTED: uncharacterized protein LOC101203417 [Cucumis sativus]
           gi|449513505|ref|XP_004164343.1| PREDICTED:
           uncharacterized LOC101203417 [Cucumis sativus]
          Length = 92

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 779 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRT 642
           M DSSA+YI MVQHLIEKCL+FHMN+DEC++ALSKHANI P+IT T
Sbjct: 1   MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITST 46


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