BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018352
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   516   e-144
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   511   e-142
ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   503   e-140
gb|AAC34223.1| putative peptide chain release factor [Arabidopsi...   503   e-140

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  516 bits (1330), Expect = e-144
 Identities = 256/300 (85%), Positives = 282/300 (94%)
 Frame = +3

Query: 3   EIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVR 182
           EIDGLKSL+AEC EDKDM +MAAEEL +A  EEKRLQNLLL SLLPKD+ADERDCILEVR
Sbjct: 82  EIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVR 141

Query: 183 AGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLK 362
           AGTGGEEASLFA+DIF+MYEKY+ K GWKF+VVDI ES LKG KEASGAI GSG +G+LK
Sbjct: 142 AGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLK 201

Query: 363 FESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 542
           FESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA
Sbjct: 202 FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 261

Query: 543 NTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQ 722
           NTTNSAVR+THIP+G+TVAIQDERSQH NKAKAL+V+CAKLYE+ERSR+   RSKLR +Q
Sbjct: 262 NTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQ 321

Query: 723 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASF 902
           IGSGDRSERIRTYNFPQGRVTDHRVGITHHS++DV++GENLDVF+DALLL+QEMDAIASF
Sbjct: 322 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQEMDAIASF 381


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545675|gb|EEF47179.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 422

 Score =  511 bits (1317), Expect = e-142
 Identities = 252/301 (83%), Positives = 285/301 (94%)
 Frame = +3

Query: 3    EIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVR 182
            EIDGL+SL+AECPEDK M DMA EEL++AI EEKRLQN+LL SLLP DDADERDCILEVR
Sbjct: 119  EIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVR 178

Query: 183  AGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLK 362
            AGTGGEEASLF++DIFRMYE+Y+ K+GWKF+VVDI ES LKG KEAS AI G+G FG+LK
Sbjct: 179  AGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLK 238

Query: 363  FESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 542
            FESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA
Sbjct: 239  FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 298

Query: 543  NTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQ 722
            NTTNSAVR+TH+PTG+TV+IQDERSQH NKAKAL+V+CAKLYE+ERSR+  SRSKLRS+Q
Sbjct: 299  NTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSEQ 358

Query: 723  IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASF 902
            IGSGDRSERIRTYNFPQGRVTDHRVGITHH+I+++++GE+LDVF+DALLL+QEMDAIASF
Sbjct: 359  IGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQEMDAIASF 418

Query: 903  S 905
            S
Sbjct: 419  S 419


>ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  506 bits (1303), Expect = e-141
 Identities = 249/302 (82%), Positives = 281/302 (93%)
 Frame = +3

Query: 3   EIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVR 182
           EIDGL+SL+ ECPEDKDM DMA EEL +A+ EEKRLQNLLL SLLP+DDADERDCILEVR
Sbjct: 55  EIDGLRSLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVR 114

Query: 183 AGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLK 362
           AG+GGEEASLFA+DIF+MYE+++   GWKF+VV I ES LKG KEAS AI G+  FG+LK
Sbjct: 115 AGSGGEEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLK 174

Query: 363 FESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 542
           FESGIHRVQRVP+TEK GRVHTSAVSVAILPQADEVD+QLRNEDLRIDTYRSGGSGGQHA
Sbjct: 175 FESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRIDTYRSGGSGGQHA 234

Query: 543 NTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQ 722
           NTTNSAVR+TH+PTG+TV+IQDERSQH NK+KAL+V+CAKLYE+ERSRLH SRS+LRS+Q
Sbjct: 235 NTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQ 294

Query: 723 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASF 902
           IGSGDRSERIRTYNFPQGRVTDHRVGITHHSI+DV++GE+LDVF+DALLL+QEMDAIASF
Sbjct: 295 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQEMDAIASF 354

Query: 903 SS 908
            S
Sbjct: 355 GS 356


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
            gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
            thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
            release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  503 bits (1295), Expect = e-140
 Identities = 242/302 (80%), Positives = 281/302 (93%)
 Frame = +3

Query: 3    EIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVR 182
            EIDGLKSL++E  +DKDM D+A  ELDEA+ EEKRLQ LLL SLLPKD+ADERDCILEVR
Sbjct: 110  EIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVR 169

Query: 183  AGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLK 362
            AGTGGEEASLFA+DIFRMYE+Y+ K+GWKFD+VDI ES +KG KEAS AICG+  +G+LK
Sbjct: 170  AGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLK 229

Query: 363  FESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 542
            FESGIHRVQR+P+TEK+GR+HTSA+SVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA
Sbjct: 230  FESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 289

Query: 543  NTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQ 722
            NTTNSAVR+ H+PTG+ V+IQDERSQH N+AKAL+V+CA+LYE+ER R+ +SRSKLRSDQ
Sbjct: 290  NTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQ 349

Query: 723  IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASF 902
            IGSGDRS RIRTYNFPQGRVTDHRVGITHH+I+D+++GENLD+F+DALLL+QEMDAIASF
Sbjct: 350  IGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASF 409

Query: 903  SS 908
            SS
Sbjct: 410  SS 411


>gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  503 bits (1295), Expect = e-140
 Identities = 242/302 (80%), Positives = 281/302 (93%)
 Frame = +3

Query: 3   EIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVR 182
           EIDGLKSL++E  +DKDM D+A  ELDEA+ EEKRLQ LLL SLLPKD+ADERDCILEVR
Sbjct: 92  EIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVR 151

Query: 183 AGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLK 362
           AGTGGEEASLFA+DIFRMYE+Y+ K+GWKFD+VDI ES +KG KEAS AICG+  +G+LK
Sbjct: 152 AGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLK 211

Query: 363 FESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 542
           FESGIHRVQR+P+TEK+GR+HTSA+SVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA
Sbjct: 212 FESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 271

Query: 543 NTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQ 722
           NTTNSAVR+ H+PTG+ V+IQDERSQH N+AKAL+V+CA+LYE+ER R+ +SRSKLRSDQ
Sbjct: 272 NTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQ 331

Query: 723 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASF 902
           IGSGDRS RIRTYNFPQGRVTDHRVGITHH+I+D+++GENLD+F+DALLL+QEMDAIASF
Sbjct: 332 IGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASF 391

Query: 903 SS 908
           SS
Sbjct: 392 SS 393