BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018351
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like...   503   e-140
ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arab...   461   e-127
ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana] gi|1865326...   460   e-127
ref|XP_003575155.1| PREDICTED: APO protein 3, mitochondrial-like...   446   e-123
ref|XP_002454004.1| hypothetical protein SORBIDRAFT_04g022910 [S...   446   e-123

>ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
            gi|297733881|emb|CBI15128.3| unnamed protein product
            [Vitis vinifera]
          Length = 418

 Score =  503 bits (1296), Expect = e-140
 Identities = 253/423 (59%), Positives = 305/423 (72%), Gaps = 22/423 (5%)
 Frame = +3

Query: 81   MHRRVVSQIFRFKHNSS------FLAFSTTLTLDADGVFDPLYTDVPNPSKRKSDRKPYP 242
            M RR++SQ    K          F A   TLTL  +GV DPLY DVP P +RKS+RKPYP
Sbjct: 1    MQRRIISQFSYSKRVHCQLSPIFFFASRRTLTLGGEGVDDPLYADVPRPCRRKSERKPYP 60

Query: 243  TPMKFLIXXXXXXXXXXXXXPCKILENAPENGLLVPELVQVAQQVYRARESLLHGLSKLV 422
            TPMK LI             P ++LE+ P+NGLLVPEL+ VA QVY+A++SLL GL KL+
Sbjct: 61   TPMKILIRRAKEEKEARKAQPSRVLEDPPDNGLLVPELIGVAHQVYQAQQSLLLGLRKLI 120

Query: 423  DIIIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVHVWKKGRIEDVILFPECFHLFD 602
            D+I PV+RCRFC EVHIG++GHEIRTC+GPKSGFRS+ HVW+KGR+ED + FP+CFHL D
Sbjct: 121  DVI-PVQRCRFCFEVHIGHMGHEIRTCTGPKSGFRSSKHVWRKGRVEDAVYFPKCFHLCD 179

Query: 603  RVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKRRTKPVYSMEGRIVDFE----- 767
            RVGKPR++HDER  + RIPA++ELCIQAGV+L+ Y TKRR +PVY +EGRIVDFE     
Sbjct: 180  RVGKPRVVHDERFNIKRIPAILELCIQAGVDLEKYPTKRRARPVYCIEGRIVDFEPETEK 239

Query: 768  ---------SDMKSVDCQLESNXXXXXXXXXXXXXXXXXXNLL--IASKVLKFWFEMRSG 914
                     SD+ +   ++E N                    L  +++  L+ WFEM SG
Sbjct: 240  DEMRRNVEASDLGTKTEEMERNSNSHNPSHFLTHSNNGEEKSLKELSTTTLESWFEMISG 299

Query: 915  AKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLDDFIGPNYVW 1094
            AKK+M+KY V+TCGYCPEVQVGPKGHKVRMC+ASKHQSRNG+HAWQEAT+DD +GPNYVW
Sbjct: 300  AKKIMEKYSVKTCGYCPEVQVGPKGHKVRMCKASKHQSRNGLHAWQEATIDDLVGPNYVW 359

Query: 1095 HVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDVVPPAPDEVD 1274
            HV+D  R +    L N LKRYYGKAPAVVELCVQ GA +PD+YRSMMRLDVVPP  DEVD
Sbjct: 360  HVQDQNRPA----LDNSLKRYYGKAPAVVELCVQGGASIPDQYRSMMRLDVVPPDRDEVD 415

Query: 1275 LVA 1283
            LVA
Sbjct: 416  LVA 418


>ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arabidopsis lyrata subsp.
            lyrata] gi|297312297|gb|EFH42721.1| hypothetical protein
            ARALYDRAFT_496364 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score =  461 bits (1186), Expect = e-127
 Identities = 229/389 (58%), Positives = 284/389 (73%), Gaps = 3/389 (0%)
 Frame = +3

Query: 126  SSFLAFSTTLTLDADGVFD--PLYTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXX 299
            SS +   T L +D   V D  PLY DVP P K KS+RKPYPTPMK LI            
Sbjct: 17   SSSIKPLTNLDVDVSVVDDDDPLYADVPKPRKDKSERKPYPTPMKELIRRAKEEKQLRKL 76

Query: 300  XPCKILENAPENGLLVPELVQVAQQVYRARESLLHGLSKLVDIIIPVKRCRFCSEVHIGN 479
             PC++LE+ P+NG+LVPELV VA  V+R R SLL GLSK++  + PV RCR CSEVHIG 
Sbjct: 77   QPCRVLEDPPDNGILVPELVDVAHCVHRCRNSLLSGLSKIIHHV-PVHRCRLCSEVHIGK 135

Query: 480  VGHEIRTCSGPKSGFRSAVHVWKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIP 659
             GHEIRTC+GP SG RSA HVWK+GR  DV+LFP+CFHL+DR  KPR++HDER  VP+I 
Sbjct: 136  QGHEIRTCTGPGSGSRSATHVWKRGRASDVVLFPKCFHLYDRAVKPRVIHDERFTVPKIS 195

Query: 660  AVVELCIQAGVNLKDYHTKRRTKPVYSMEGRIVDFESDMKSVDCQLESNXXXXXXXXXXX 839
            AV+ELCIQAGV+L+ + +KRR+KPVYS+EGRIVDFE D+   + ++              
Sbjct: 196  AVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFE-DVNCENSEIAVTSTTTLLQEDDC 254

Query: 840  XXXXXXXNLL-IASKVLKFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRAS 1016
                   +L  ++ + ++ WFEM SG +KL+++Y+V TCGYCPE+QVGPKGHKVRMC+A+
Sbjct: 255  CKEEKKKSLKELSIETMESWFEMVSGVRKLIERYKVWTCGYCPEIQVGPKGHKVRMCKAT 314

Query: 1017 KHQSRNGMHAWQEATLDDFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQ 1196
            KHQ R+GMHAWQEAT+DD +GPNYVWHVRD    +   +L N LKR+YGKAPAVVE+CVQ
Sbjct: 315  KHQMRDGMHAWQEATIDDVVGPNYVWHVRDP---TDGSVLDNSLKRFYGKAPAVVEMCVQ 371

Query: 1197 AGAPVPDEYRSMMRLDVVPPAPDEVDLVA 1283
             GAP+PD+Y+SMMRLDVV P  DEVDLVA
Sbjct: 372  GGAPIPDQYKSMMRLDVVYPQRDEVDLVA 400


>ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana] gi|186532654|ref|NP_001119475.1|
            APO protein 3 [Arabidopsis thaliana]
            gi|68565076|sp|Q9FH50.1|APO3_ARATH RecName: Full=APO
            protein 3, mitochondrial; Flags: Precursor
            gi|9758392|dbj|BAB08879.1| unnamed protein product
            [Arabidopsis thaliana] gi|332010155|gb|AED97538.1| APO
            protein 3 [Arabidopsis thaliana]
            gi|332010156|gb|AED97539.1| APO protein 3 [Arabidopsis
            thaliana]
          Length = 402

 Score =  460 bits (1184), Expect = e-127
 Identities = 228/395 (57%), Positives = 282/395 (71%), Gaps = 2/395 (0%)
 Frame = +3

Query: 105  IFRFKHNSSFLAFSTTLTLDA--DGVFDPLYTDVPNPSKRKSDRKPYPTPMKFLIXXXXX 278
            + R  + SS +   T L +D   D   DPLY DVP P K KS+RKPYPTPMK LI     
Sbjct: 13   VIRKSNFSSSIKSLTNLDVDVSVDNDEDPLYADVPKPPKDKSERKPYPTPMKELIRRAKE 72

Query: 279  XXXXXXXXPCKILENAPENGLLVPELVQVAQQVYRARESLLHGLSKLVDIIIPVKRCRFC 458
                    PC++LE+ P+NGLLVPELV VA  V+R R  LL GLSK++  + PV RCR C
Sbjct: 73   EKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNMLLSGLSKIIHHV-PVHRCRLC 131

Query: 459  SEVHIGNVGHEIRTCSGPKSGFRSAVHVWKKGRIEDVILFPECFHLFDRVGKPRILHDER 638
            +EVHIG  GHEIRTC+GP SG RSA HVWK+GR+ DV+LFP+CFHL+DR  KPR++HDER
Sbjct: 132  AEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDER 191

Query: 639  SRVPRIPAVVELCIQAGVNLKDYHTKRRTKPVYSMEGRIVDFESDMKSVDCQLESNXXXX 818
              VP+I AV+ELCIQAGV+L+ + +KRR+KPVYS+EGRIVDFE D+   + +L       
Sbjct: 192  FTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFE-DVNDGNSELAVTSTTT 250

Query: 819  XXXXXXXXXXXXXXNLLIASKVLKFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKV 998
                             ++ + ++ WFEM  G +KLM++Y+V TCGYCPE+QVGPKGHKV
Sbjct: 251  LIQEDDRCKEEKKSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKV 310

Query: 999  RMCRASKHQSRNGMHAWQEATLDDFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAV 1178
            RMC+A+KHQ R+GMHAWQEAT+DD +GP YVWHVRD    +   +L N LKR+YGKAPAV
Sbjct: 311  RMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVRDP---TDGSVLDNSLKRFYGKAPAV 367

Query: 1179 VELCVQAGAPVPDEYRSMMRLDVVPPAPDEVDLVA 1283
            +E+CVQ GAPVPD+Y SMMRLDVV P  DEVDLVA
Sbjct: 368  IEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402


>ref|XP_003575155.1| PREDICTED: APO protein 3, mitochondrial-like [Brachypodium
            distachyon]
          Length = 416

 Score =  446 bits (1147), Expect = e-123
 Identities = 219/375 (58%), Positives = 266/375 (70%), Gaps = 10/375 (2%)
 Frame = +3

Query: 189  YTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXXPCKILENAPENGLLVPELVQVA 368
            Y DVP P  RK +RKPY TPMK LI             PC++LE+ P NGLLVP LV+VA
Sbjct: 43   YADVPRPG-RKQERKPYVTPMKALIRRAKEERRVRQENPCRVLEHPPGNGLLVPHLVEVA 101

Query: 369  QQVYRARESLLHGLSKLV--DIIIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVHV 542
             QV+RARE  L GL++LV  +  +PVKRCRFCSE+HIGNVGHEIRTC GP+SG R+++HV
Sbjct: 102  HQVHRARERFLAGLTRLVKGEAAMPVKRCRFCSELHIGNVGHEIRTCEGPQSGSRNSLHV 161

Query: 543  WKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKRR 722
            W+ G + DV+ FP C+HL DRVGKPR++  E+  VPR+PA++ELCIQAGV++  Y TKRR
Sbjct: 162  WQPGTVRDVVGFPYCYHLSDRVGKPRVVRKEKYEVPRLPAILELCIQAGVDIGRYPTKRR 221

Query: 723  TKPVYSMEGRIVDFESDMKSVDCQLESNXXXXXXXXXXXXXXXXXXNLL--------IAS 878
            T+PVYS++GRI DFE D +    + E++                             + S
Sbjct: 222  TRPVYSIDGRIADFELDEEEESLEAETSPEPSLLSPTGSASTADGSEQTEQEMTVRELGS 281

Query: 879  KVLKFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEA 1058
            + L+ W +MRSGA +LM KY V TCGYCP+VQVGPKGHKVRMC+ASKHQ R+G HAWQEA
Sbjct: 282  RTLQSWLDMRSGAARLMRKYGVVTCGYCPDVQVGPKGHKVRMCKASKHQQRDGQHAWQEA 341

Query: 1059 TLDDFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMR 1238
            T+DD + PNYVWHVRD         L NELKRYYGKAPAVVELCV+AGA VP +Y+SMMR
Sbjct: 342  TVDDLVPPNYVWHVRDPAGAGDGAPLANELKRYYGKAPAVVELCVRAGAQVPAQYKSMMR 401

Query: 1239 LDVVPPAPDEVDLVA 1283
            LDVVPPA DE DLVA
Sbjct: 402  LDVVPPARDEYDLVA 416


>ref|XP_002454004.1| hypothetical protein SORBIDRAFT_04g022910 [Sorghum bicolor]
            gi|241933835|gb|EES06980.1| hypothetical protein
            SORBIDRAFT_04g022910 [Sorghum bicolor]
          Length = 423

 Score =  446 bits (1147), Expect = e-123
 Identities = 226/372 (60%), Positives = 266/372 (71%), Gaps = 7/372 (1%)
 Frame = +3

Query: 189  YTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXXPCKILENAPENGLLVPELVQVA 368
            Y DVP P  RK +RKPY TPMK LI             PC++LE+ P+NGL+VP LV VA
Sbjct: 54   YVDVPRPG-RKWERKPYVTPMKVLIRRAKEERQARRESPCRVLEHPPDNGLVVPHLVDVA 112

Query: 369  QQVYRARESLLHGLSKLVDI--IIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVHV 542
            ++V+ ARE LL GL++LV+    IPVKRCRFCSEVHIG VGHEIRTC G  SG R+++HV
Sbjct: 113  RRVHAAREGLLGGLTRLVEGEGAIPVKRCRFCSEVHIGRVGHEIRTCEGRNSGARNSLHV 172

Query: 543  WKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKRR 722
            W+ G + DV+ FP C+HLFDRVGKPR++H E+  VPR+PAV+ELCIQAGV++  Y TKRR
Sbjct: 173  WRPGTVRDVVGFPYCYHLFDRVGKPRVVHKEKYDVPRLPAVMELCIQAGVDVPRYPTKRR 232

Query: 723  TKPVYSMEGRIVDFESDMKSVDCQLESNXXXXXXXXXXXXXXXXXXNLLI-----ASKVL 887
            T+PVYS+EGRIVDFE D ++     E                       I     AS+ L
Sbjct: 233  TRPVYSIEGRIVDFEPDDEAAGTSPEPPACTPLLPPAAGVVNGEGEESEITVPELASRTL 292

Query: 888  KFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLD 1067
            + W +MRSGA +LM KY V TCGYCP+VQVGPKGHKVRMCRA+KHQ R+G HAWQEAT+D
Sbjct: 293  QSWLDMRSGAARLMKKYSVHTCGYCPDVQVGPKGHKVRMCRATKHQQRDGQHAWQEATVD 352

Query: 1068 DFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDV 1247
            D + PNYVWHV D      +  L NELKRYYGKAPAVVELCVQAGAPVP  YRSMMRLDV
Sbjct: 353  DLVPPNYVWHVADPAG-DESLPLANELKRYYGKAPAVVELCVQAGAPVPAAYRSMMRLDV 411

Query: 1248 VPPAPDEVDLVA 1283
            VPPA DE DLVA
Sbjct: 412  VPPARDEYDLVA 423