BLASTX nr result

ID: Coptis25_contig00018349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018349
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...    72   4e-11
ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichoca...    72   4e-11
gb|ABA92135.1| Leucine Rich Repeat family protein, expressed [Or...    72   6e-11
ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|EEE51849.1| hypothetical protein OsJ_33356 [Oryza sativa Japo...    72   6e-11

>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1053

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 25/110 (22%)
 Frame = +3

Query: 72   QELHIYDCDKLKRLPTE-LENLSTVMILLILSCGGLESL-REGLRNLTSLKKLVVEDCRS 245
            + L I DC KL+ LP E L NL+++ +L I  CG L  L   GL  L+SL+KLV+ DC  
Sbjct: 921  KSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGLSSLRKLVIVDCDK 980

Query: 246  LKSLSES-----------------------SLQHLTALQKLEIWDCPELE 326
              SLSE                        S+QHLT+LQ L IWDCP LE
Sbjct: 981  FTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTIWDCPNLE 1030


>ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844631|gb|EEE82178.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 968

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 25/110 (22%)
 Frame = +3

Query: 72   QELHIYDCDKLKRLPTE-LENLSTVMILLILSCGGLESL-REGLRNLTSLKKLVVEDCRS 245
            + L I DC KL+ LP E L NL+++ +L I  CG L  L   GL  L+SL+KLV+ DC  
Sbjct: 836  KSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGLSSLRKLVIVDCDK 895

Query: 246  LKSLSES-----------------------SLQHLTALQKLEIWDCPELE 326
              SLSE                        S+QHLT+LQ L IWDCP LE
Sbjct: 896  FTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTIWDCPNLE 945


>gb|ABA92135.1| Leucine Rich Repeat family protein, expressed [Oryza sativa Japonica
            Group]
          Length = 895

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/85 (44%), Positives = 55/85 (64%)
 Frame = +3

Query: 72   QELHIYDCDKLKRLPTELENLSTVMILLILSCGGLESLREGLRNLTSLKKLVVEDCRSLK 251
            QELHI  C +L   P  ++ L++++ L +  C  + +L E L NLTSLK L + +CR +K
Sbjct: 791  QELHISHCQRLNSFPEGMQYLTSLLSLHLSYCESISALPEWLGNLTSLKTLQIWECRGIK 850

Query: 252  SLSESSLQHLTALQKLEIWDCPELE 326
            SL E S++ LT L+ LEI  CPEL+
Sbjct: 851  SLPE-SIEQLTMLEHLEISGCPELK 874


>ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|222832701|gb|EEE71178.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 26/111 (23%)
 Frame = +3

Query: 72  QELHIYDCDKLKRLPTE-LENLSTVMILLILSCG-----------GLESLR--------- 188
           + L I++C KL+ LP E L NL+++  L+I  CG           GL SLR         
Sbjct: 19  KRLSIWECGKLESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLCGLSSLRRLNIQYCDK 78

Query: 189 -----EGLRNLTSLKKLVVEDCRSLKSLSESSLQHLTALQKLEIWDCPELE 326
                EG+R+LT+L+ L + +C  L SL ES +QHLT+L+ L IWDCP L+
Sbjct: 79  FTSLSEGVRHLTALEDLWLSECPELNSLPES-IQHLTSLRSLTIWDCPNLK 128


>gb|EEE51849.1| hypothetical protein OsJ_33356 [Oryza sativa Japonica Group]
          Length = 946

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/85 (44%), Positives = 55/85 (64%)
 Frame = +3

Query: 72   QELHIYDCDKLKRLPTELENLSTVMILLILSCGGLESLREGLRNLTSLKKLVVEDCRSLK 251
            QELHI  C +L   P  ++ L++++ L +  C  + +L E L NLTSLK L + +CR +K
Sbjct: 822  QELHISHCQRLNSFPEGMQYLTSLLSLHLSYCESISALPEWLGNLTSLKTLQIWECRGIK 881

Query: 252  SLSESSLQHLTALQKLEIWDCPELE 326
            SL E S++ LT L+ LEI  CPEL+
Sbjct: 882  SLPE-SIEQLTMLEHLEISGCPELK 905


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