BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018348
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   136   1e-85
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   146   3e-51
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]   119   7e-51
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   132   1e-49
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   129   2e-49

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  136 bits (343), Expect(5) = 1e-85
 Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
 Frame = +3

Query: 1023 GFHSRNFNGNS--ETYCYICKKYDHEAKDCRFKCNRCRNPNHSQRDC*YKTRWEENTTNF 1196
            G H R   G    +   Y  +  +        +C  C+   H Q +C  K R E+     
Sbjct: 223  GAHGRGGRGRGRGDAQGYQRQSTEKNRNKSNIQCYYCKRFGHVQXECWKKERQEKQANYV 282

Query: 1197 TEGNDEDQLFYSCMNAENENQDTWYLDSGYSNHMTGNQRIFVQLDDSFSSHVKLRDGNMK 1376
             +  D+ +LF         + + W+LDSG SNHMTG + +F +LD+S    VKL D    
Sbjct: 283  EQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQV 342

Query: 1377 KIEGKGVSVVYTKRGNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKK 1556
             +EGKG+  V    GN KL+++V ++P LTQNLLSVGQL+   YSI FD   C I DKK 
Sbjct: 343  XVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKS 402

Query: 1557 IFTIANVNMTRNKVFSLLMSLREKVAFKTEKLNK 1658
               I NV M  NK+F L +S  EK A   ++ ++
Sbjct: 403  DQIIVNVRMAANKLFPLEVSSIEKHALVVKETSE 436



 Score = 95.1 bits (235), Expect(5) = 1e-85
 Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +2

Query: 1658 NESHLWHLRYGHLSYKGLSMLKSNNMVIGLPSIDKMCEVCEGCIYGKMCKLSFPK-TSCR 1834
            +ES+LWHLRYGHL+ KGL +L    MV GLP ID +  VCEGCIYGK  K  FPK  S R
Sbjct: 435  SESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRR 493

Query: 1835 AQAPLELVHADVFGPTRTPS 1894
            A + LE++HAD+ GP +T S
Sbjct: 494  ASSCLEIIHADLCGPMQTAS 513



 Score = 67.8 bits (164), Expect(5) = 1e-85
 Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = +2

Query: 719 IQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSLEAHEKRLNRFANSSLQS 892
           I D+ +V K+LRSL   FDHVVAAIE SKDLS +SF ELMGSL++HE RL+R    + + 
Sbjct: 137 ILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEEKNEEK 196

Query: 893 SMNVDGE*KSQ 925
           +    GE   Q
Sbjct: 197 AFYTKGETSDQ 207



 Score = 63.5 bits (153), Expect(5) = 1e-85
 Identities = 35/87 (40%), Positives = 53/87 (60%)
 Frame = +3

Query: 276 MASSSNSTFNYATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRN 455
           MA+++ S  + +  ++PIF GE Y++WSI MKT+F SQDLW+LV++GY        LK N
Sbjct: 1   MATTNGSMVSVSQPTIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARLKEN 60

Query: 456 QREMQKLSNLFIKW*VNPSFLELWAQA 536
            ++  K +  FI+  V+ S     A A
Sbjct: 61  TKKDSK-ALFFIQQAVHESIFSKIAAA 86



 Score = 45.4 bits (106), Expect(5) = 1e-85
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +1

Query: 547 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEFSYK 675
           W  L+  F G  +VI++KLQSL RDF+ L MK  E++Q+F  K
Sbjct: 93  WTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESMQDFFVK 135


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  146 bits (369), Expect(2) = 3e-51
 Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
 Frame = +3

Query: 1050 NSETYCYICKKYDHEAKDC--RFKCNRCRNPNHSQRDC*YKTRWEENTTNFTEGNDE-DQ 1220
            +S  +C IC+K  H    C  +  CN+C+   H  + C  +TR E N  NF++  ++ ++
Sbjct: 254  SSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYC--RTR-EINRANFSQEKEKSEE 310

Query: 1221 LFYSCMNAENENQDTWYLDSGYSNHMTGNQRIFVQLDDSFSSHVKLRDGNMKKIEGKGVS 1400
            + +SC  A+ E  D W +DSG +NHM  +  +F ++D S+ + + + +G++ + EGKG  
Sbjct: 311  MVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTV 370

Query: 1401 VVYTKRGNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVN 1580
             V T  G  K I DVL VP L QNLLS+GQLL+  Y+++F+D  C I+D+K    +A +N
Sbjct: 371  AVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKIN 429

Query: 1581 MTRNKVFSLLMSLREKVAFKTE 1646
            M +N+ F L M+   ++A ++E
Sbjct: 430  MEKNRNFLLRMNHTTQMALRSE 451



 Score = 84.0 bits (206), Expect(2) = 3e-51
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +2

Query: 1664 SHLWHLRYGHLSYKGLSMLKSNNMVIGLPSIDKMCEVCEGCIYGKMCKLSFPKTSC-RAQ 1840
            S LWH R GHL+Y+ L +L++  MV GLP I    + CEGC++GK  + SFP +   RA 
Sbjct: 455  SDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRAS 514

Query: 1841 APLELVHADVFGPTRTPS 1894
            APLELVHAD+ G   T S
Sbjct: 515  APLELVHADIVGKVPTIS 532



 Score = 69.7 bits (169), Expect(2) = 4e-20
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
 Frame = +2

Query: 476 LQFIHQVVSKSIFP*TMGASKSKDG--KFYKRNLGAAMKSSLSSFNLYGEISII*P*KKV 649
           L  I Q V++S+FP  +GA KSK+   K  +   G+    ++    L  +   +   K+ 
Sbjct: 66  LFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM-KES 124

Query: 650 RMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFH 823
              K   +RV EIV+Q+R  G+ I D+K+V+KIL SLP  ++++VAA E SKDLSK    
Sbjct: 125 EKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSK---- 180

Query: 824 ELMGSLEAHEKRLNRFANSSLQSS 895
               SLE+HE+R  +   SS++++
Sbjct: 181 ---DSLESHEERKLQREGSSIENA 201



 Score = 56.6 bits (135), Expect(2) = 4e-20
 Identities = 23/52 (44%), Positives = 37/52 (71%)
 Frame = +3

Query: 309 ATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRNQRE 464
           A + VP+F GE+YD WSI M+T+ +SQ LW++V++GY E  + + L   Q++
Sbjct: 2   AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKK 53


>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
          Length = 1220

 Score =  119 bits (299), Expect(5) = 7e-51
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%)
 Frame = +3

Query: 1065 CYICKKYDHEAKDC------RFKCNRCRNPNHSQRDC*YKTRW-----EENTTNFTEG-N 1208
            C+ C++ +H  KDC       F CN C    HS++ C  K +      E+N +   E  N
Sbjct: 227  CFHCRRTNHAEKDCWNKGKPLFNCNFCNKLCHSEKYCRAKKKQSQQQPEKNASVIEENKN 286

Query: 1209 DEDQLFYSCMNAENENQDTWYLDSGYSNHMTGNQRIFVQLDDSFSSHVKLRDGNMKKIEG 1388
            D++ LF +     +   +TW +DSG ++HMT    IF  +D S    VKL +G + + +G
Sbjct: 287  DDEHLFMASQTLSSHELNTWLIDSGCTSHMTKYLSIFTSIDRSVQPKVKLGNGEVVQAKG 346

Query: 1389 KGVSVVYTKRGNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTI 1568
            KG   + TKRG  K++ +VLY+P L QNLLSV Q+L+  Y++ F +N C I + ++   I
Sbjct: 347  KGTIAISTKRGT-KIVTNVLYIPDLDQNLLSVAQMLRNGYAVSFKENFCFITNVQE-KEI 404

Query: 1569 ANVNMTRNKVFSLLMSLREKVAFKTE 1646
            A + M  N +F L + L E   F  +
Sbjct: 405  AKIKMNGN-IFYLKLDLVEGHVFSAK 429



 Score = 58.9 bits (141), Expect(5) = 7e-51
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +2

Query: 1658 NESHLWHLRYGHLSYKGLSMLKSNNMVIGLPSIDKMCEVCEGCIYGKMCKLSFPKT-SCR 1834
            +ES +WH  YGH + K L  ++   MV  +  I    + CE C  GK  +  FP+  S R
Sbjct: 431  DESVVWHKSYGHFNLKSLRFMQEAGMVEDMLEISVNAQTCESCELGKQQRQPFPQNMSKR 490

Query: 1835 AQAPLELVHADVFGPTRTPSLNN 1903
            A   LEL+H+ + GP    SL+N
Sbjct: 491  ATHELELIHSYICGPMSIASLSN 513



 Score = 49.7 bits (117), Expect(5) = 7e-51
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +2

Query: 674 RVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSLEA 847
           R+ ++V+Q+R LG+   D+K+V+KI+ S+P  F+  ++AIE S DL   +  EL   L A
Sbjct: 114 RLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTLTIVELTSKLHA 173

Query: 848 HEKRLNRFANSSLQSSMNVDGE*KSQSRP*KKERLISKKG 967
            E+R+    + + + +   + + K+      K+   + KG
Sbjct: 174 QEQRVLMRGDKATEGAFQANHKGKNSGNLQGKKFFKNNKG 213



 Score = 38.9 bits (89), Expect(5) = 7e-51
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 276 MASSSNSTFNYATTSVPIFDGEHYDYWSI*MKTIFISQDLWELV---QDGYAEGGSAKIL 446
           M+ SSN++     + +P+F+GEHY  W++ M+    SQ LW +V    D    G +  + 
Sbjct: 1   MSPSSNTS-----SVIPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEDDPPPLGANPTVA 55

Query: 447 KRNQREMQKL 476
           +    E +KL
Sbjct: 56  QMKAYEEEKL 65



 Score = 23.5 bits (49), Expect(5) = 7e-51
 Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +1

Query: 523 YGRKQIKRWEILQKEFGGCDEVISIKLQSL----WRDFDNLTMKESENVQEFS 669
           Y  +++K+ + +     G  + I  K+ +L     R+F+ + MK+ E+V+++S
Sbjct: 60  YEEEKLKKDKAITCLHSGLADHIFTKIMNLETPKQREFELMKMKDDESVKDYS 112


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  132 bits (332), Expect(2) = 1e-49
 Identities = 73/182 (40%), Positives = 103/182 (56%)
 Frame = +3

Query: 1113 KCNRCRNPNHSQRDC*YKTRWEENTTNFTEGNDEDQLFYSCMNAENENQDTWYLDSGYSN 1292
            +C  C+   H Q +C  K R E+      +  D+ +LF +       + + W+LDSG SN
Sbjct: 241  QCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGCSN 300

Query: 1293 HMTGNQRIFVQLDDSFSSHVKLRDGNMKKIEGKGVSVVYTKRGNRKLIHDVLYVPGLTQN 1472
            HMTG + +F +LD+S    VKL D     +EGKG   V    GN KL+++V ++P LTQN
Sbjct: 301  HMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQN 360

Query: 1473 LLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKVFSLLMSLREKVAFKTEKL 1652
            LLSVGQL+   YSI FD + C I DKK    I +V M  NK+F L +S  EK A   ++ 
Sbjct: 361  LLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIEKHALVVKET 420

Query: 1653 NK 1658
            ++
Sbjct: 421  SE 422



 Score = 92.8 bits (229), Expect(2) = 1e-49
 Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = +2

Query: 1658 NESHLWHLRYGHLSYKGLSMLKSNNMVIGLPSIDKMCEVCEGCIYGKMCKLSFPK-TSCR 1834
            +ES+LWHLRYGHL+ KGL +L    MV GLP ID +  VCEGCIYGK  K  FPK  S R
Sbjct: 421  SESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRR 479

Query: 1835 AQAPLELVHADVFGPTRTPS 1894
            A + LE++HAD+ GP +  S
Sbjct: 480  ASSCLEIIHADLCGPMQIAS 499



 Score = 86.3 bits (212), Expect(3) = 9e-33
 Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = +2

Query: 668 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 841
           L+RVA IV+Q+RS G+ I D+ +V K+LRSL   FDHVVAAIE SKDLS +SF ELMGSL
Sbjct: 106 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSL 165

Query: 842 EAHEKRLNRFANSSLQSSMNVDGE*KSQ 925
           ++HE RL+R    + + +    GE   Q
Sbjct: 166 QSHEXRLSRTXEKNEEKTFYTKGETSDQ 193



 Score = 63.2 bits (152), Expect(3) = 9e-33
 Identities = 29/66 (43%), Positives = 44/66 (66%)
 Frame = +3

Query: 276 MASSSNSTFNYATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRN 455
           MA+++ S  + +  ++PIF GE Y++WSI MKT+F SQDLW+LV++GY        LK N
Sbjct: 1   MATTNGSMVSVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARLKEN 60

Query: 456 QREMQK 473
            ++  K
Sbjct: 61  TKKDSK 66



 Score = 39.7 bits (91), Expect(3) = 9e-33
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +1

Query: 574 GCDEVISIKLQSLWRDFDNLTMKESENVQEF 666
           G  +VI++KLQSL RDF+ L MK  E+VQ+F
Sbjct: 75  GSSKVITVKLQSLRRDFETLHMKNGESVQDF 105


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  129 bits (325), Expect(2) = 2e-49
 Identities = 72/179 (40%), Positives = 101/179 (56%)
 Frame = +3

Query: 1122 RCRNPNHSQRDC*YKTRWEENTTNFTEGNDEDQLFYSCMNAENENQDTWYLDSGYSNHMT 1301
            R R    +Q +C  K R E+      +  D+ +LF +       + + W+LDSG SNHMT
Sbjct: 243  RGRGRGDAQXECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMT 302

Query: 1302 GNQRIFVQLDDSFSSHVKLRDGNMKKIEGKGVSVVYTKRGNRKLIHDVLYVPGLTQNLLS 1481
            G + +F +LD+S    VKL D    ++EGKG   V    GN KL+++V ++P LTQNLLS
Sbjct: 303  GIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLS 362

Query: 1482 VGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKVFSLLMSLREKVAFKTEKLNK 1658
            VGQL+   YSI FD   C I DKK    I +V M  NK+F L +S  EK A   ++ ++
Sbjct: 363  VGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSE 421



 Score = 95.1 bits (235), Expect(2) = 2e-49
 Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +2

Query: 1658 NESHLWHLRYGHLSYKGLSMLKSNNMVIGLPSIDKMCEVCEGCIYGKMCKLSFPK-TSCR 1834
            +ES+LWHLRYGHL+ KGL +L    MV GLP ID +  VCEGCIYGK  K  FPK  S R
Sbjct: 420  SESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRR 478

Query: 1835 AQAPLELVHADVFGPTRTPS 1894
            A + LE++HAD+ GP +T S
Sbjct: 479  ASSCLEIIHADLCGPMQTAS 498



 Score = 85.1 bits (209), Expect(3) = 4e-34
 Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +2

Query: 668 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 841
           L+RVA IV+Q+RS G+ I D+ +V K+LRSL   FDHVVAAIE SKDLS +SF ELMGSL
Sbjct: 133 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSL 192

Query: 842 EAHEKRLNRFANSSLQSSMNVDGE*KSQ 925
           ++HE RL+R    + +      GE   Q
Sbjct: 193 QSHEVRLSRTEEKNEEKXFYTKGETSDQ 220



 Score = 62.8 bits (151), Expect(3) = 4e-34
 Identities = 29/66 (43%), Positives = 44/66 (66%)
 Frame = +3

Query: 276 MASSSNSTFNYATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRN 455
           MA+++ S  + +  ++PIF GE Y++WSI MKT+F SQDLW+LV++GY        LK N
Sbjct: 1   MATTNXSMVSVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARLKEN 60

Query: 456 QREMQK 473
            ++  K
Sbjct: 61  TKKDSK 66



 Score = 45.8 bits (107), Expect(3) = 4e-34
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +1

Query: 547 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 666
           W  L+  F G  +VI++KLQSL RDF+ L MK  E+VQ+F
Sbjct: 93  WTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDF 132