BLASTX nr result

ID: Coptis25_contig00018340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018340
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17183.3| unnamed protein product [Vitis vinifera]              108   4e-21
ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265...   108   5e-21
ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17
ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15
ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823...    85   4e-14

>emb|CBI17183.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  108 bits (270), Expect = 4e-21
 Identities = 49/89 (55%), Positives = 61/89 (68%)
 Frame = +3

Query: 1068 MLDKSTSTQPTGLKTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRY 1247
            +++ S ++Q    K  V WGW F++FG + FLGF+YAAV+SKLLPPS N ++SAIQKDRY
Sbjct: 73   IMNTSITSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRY 132

Query: 1248 YCXXXXXXXXXXXXXXYFHWLSMKLFKHA 1334
            YC              YFHWLSMKLFKHA
Sbjct: 133  YCFLVPLTIPILIVAVYFHWLSMKLFKHA 161


>ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265449 [Vitis vinifera]
          Length = 88

 Score =  108 bits (269), Expect = 5e-21
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = +3

Query: 1071 LDKSTSTQPTGLKTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYY 1250
            ++ S ++Q    K  V WGW F++FG + FLGF+YAAV+SKLLPPS N ++SAIQKDRYY
Sbjct: 1    MNTSITSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYY 60

Query: 1251 CXXXXXXXXXXXXXXYFHWLSMKLFKHA 1334
            C              YFHWLSMKLFKHA
Sbjct: 61   CFLVPLTIPILIVAVYFHWLSMKLFKHA 88


>ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|222849758|gb|EEE87305.1|
            predicted protein [Populus trichocarpa]
          Length = 85

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = +3

Query: 1107 KTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 1286
            +T    GW FI+ G +SF+GF++AAV+SKLLP SDNP++SAIQ DRYYC           
Sbjct: 10   ETATFRGWLFILMGSVSFVGFLFAAVISKLLPLSDNPIISAIQNDRYYCFLVPLTLPILV 69

Query: 1287 XXXYFHWLSMKLFKHA 1334
               YFHWLSMK+FKHA
Sbjct: 70   SAVYFHWLSMKMFKHA 85


>ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|222859557|gb|EEE97104.1|
            predicted protein [Populus trichocarpa]
          Length = 80

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +3

Query: 1107 KTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 1286
            KT    GW  I+ G +SF+GF+ AAV+SKLLP SD+P++SAIQ DRYYC           
Sbjct: 5    KTATFSGWLLILIGSVSFVGFLSAAVISKLLPLSDSPIISAIQNDRYYCFLVPLTLPILI 64

Query: 1287 XXXYFHWLSMKLFKHA 1334
               Y HWLSMKLFKHA
Sbjct: 65   IAVYSHWLSMKLFKHA 80


>ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823748 [Brachypodium
            distachyon]
          Length = 79

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +3

Query: 1119 LWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXXXXXY 1298
            L G  F+ FG + F+GF YAAV+SKLLPP +N +LSAIQ DRYYC              Y
Sbjct: 8    LVGSAFVAFGILLFVGFFYAAVVSKLLPPYENRLLSAIQNDRYYCLLVPLTLPVIIVAVY 67

Query: 1299 FHWLSMKLFKHA 1334
             HWLSMK+FKHA
Sbjct: 68   LHWLSMKMFKHA 79


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