BLASTX nr result

ID: Coptis25_contig00018324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018324
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY87984.1| hypothetical protein OsI_09406 [Oryza sativa Indi...    75   7e-12
ref|NP_001048484.1| Os02g0813300 [Oryza sativa Japonica Group] g...    74   1e-11
ref|XP_002453022.1| hypothetical protein SORBIDRAFT_04g036840 [S...    72   6e-11
gb|AFW73981.1| hypothetical protein ZEAMMB73_261069 [Zea mays]         69   3e-10
gb|AFW73979.1| phloem-specific lectin [Zea mays]                       69   3e-10

>gb|EAY87984.1| hypothetical protein OsI_09406 [Oryza sativa Indica Group]
          Length = 297

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = +1

Query: 46  HIKTWMPLTYMKYRFAEVAGLVCLCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLD 225
           H   W+PLT    RFAE A L+ +C L+I G+I ++MLSPN+TYAAY+VFK+ D+ YGLD
Sbjct: 122 HYWRWIPLT--DSRFAEGAELIDVCWLEIHGRIHSKMLSPNSTYAAYMVFKIADEFYGLD 179

Query: 226 NPTTEGSV 249
            P  E SV
Sbjct: 180 APFQEASV 187


>ref|NP_001048484.1| Os02g0813300 [Oryza sativa Japonica Group]
           gi|47847859|dbj|BAD21652.1| F-box family protein-like
           [Oryza sativa Japonica Group]
           gi|47848539|dbj|BAD22391.1| F-box family protein-like
           [Oryza sativa Japonica Group]
           gi|113538015|dbj|BAF10398.1| Os02g0813300 [Oryza sativa
           Japonica Group] gi|125584118|gb|EAZ25049.1| hypothetical
           protein OsJ_08840 [Oryza sativa Japonica Group]
           gi|215704410|dbj|BAG93844.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765870|dbj|BAG87567.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 297

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = +1

Query: 46  HIKTWMPLTYMKYRFAEVAGLVCLCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLD 225
           H   W+PLT    RFAE A L+ +C L+I G+I ++MLSPN+TYAAY+VFK+ D+ YGLD
Sbjct: 122 HYWRWIPLT--DSRFAEGAELIDVCWLEIRGRIHSKMLSPNSTYAAYMVFKIADEFYGLD 179

Query: 226 NPTTEGSV 249
            P  E SV
Sbjct: 180 APFQEASV 187


>ref|XP_002453022.1| hypothetical protein SORBIDRAFT_04g036840 [Sorghum bicolor]
           gi|241932853|gb|EES05998.1| hypothetical protein
           SORBIDRAFT_04g036840 [Sorghum bicolor]
          Length = 278

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = +1

Query: 58  WMPLTYMKYRFAEVAGLVCLCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLD 225
           W+PLT    RF+E A L+ +C L+I G+I  +MLS NTTYAAY+VFK++D+SYGLD
Sbjct: 128 WIPLTLTDSRFSECAELLAVCWLEIRGKIHCKMLSQNTTYAAYMVFKMSDRSYGLD 183


>gb|AFW73981.1| hypothetical protein ZEAMMB73_261069 [Zea mays]
          Length = 285

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 46/64 (71%)
 Frame = +1

Query: 58  WMPLTYMKYRFAEVAGLVCLCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTT 237
           W+PLT    RF+E A L  +C L+I G+I  +MLS NTTYAAY+VFK++D+SYGLD P  
Sbjct: 113 WIPLT--DSRFSECAELQHVCWLEIRGKIPCDMLSRNTTYAAYMVFKMSDESYGLDYPLQ 170

Query: 238 EGSV 249
           E  V
Sbjct: 171 EAEV 174


>gb|AFW73979.1| phloem-specific lectin [Zea mays]
          Length = 302

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 46/64 (71%)
 Frame = +1

Query: 58  WMPLTYMKYRFAEVAGLVCLCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTT 237
           W+PLT    RF+E A L  +C L+I G+I  +MLS NTTYAAY+VFK++D+SYGLD P  
Sbjct: 130 WIPLT--DSRFSECAELQHVCWLEIRGKIPCDMLSRNTTYAAYMVFKMSDESYGLDYPLQ 187

Query: 238 EGSV 249
           E  V
Sbjct: 188 EAEV 191


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