BLASTX nr result

ID: Coptis25_contig00018315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018315
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit ...   250   1e-64
ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit ...   250   1e-64
ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] ...   248   3e-64
ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arab...   248   5e-64
ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit ...   236   2e-60

>ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit 3-like, partial
           [Cucumis sativus]
          Length = 380

 Score =  250 bits (638), Expect = 1e-64
 Identities = 122/158 (77%), Positives = 140/158 (88%)
 Frame = +1

Query: 4   AYDSISVFSSRKDNQDAVFGAGEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 183
           AYDSIS FSSR+DNQDA+FG  EGLK+IR+AT+ YK E L+LQ+QL  LQSQ+D+LT QA
Sbjct: 78  AYDSISAFSSRRDNQDALFGGEEGLKEIREATVAYKSEALQLQRQLSHLQSQYDMLTSQA 137

Query: 184 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 363
           STL QGRRARVAATS+VNGQLT +DD +SARNLE NAVLGRIASTAQEL+H+HSGDEDGI
Sbjct: 138 STLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGRIASTAQELAHYHSGDEDGI 197

Query: 364 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVA 477
           YL YSDFH YL+GDS+C KELNQWF KQ +TGP+RLVA
Sbjct: 198 YLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVA 235


>ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis
           sativus]
          Length = 615

 Score =  250 bits (638), Expect = 1e-64
 Identities = 122/158 (77%), Positives = 140/158 (88%)
 Frame = +1

Query: 4   AYDSISVFSSRKDNQDAVFGAGEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 183
           AYDSIS FSSR+DNQDA+FG  EGLK+IR+AT+ YK E L+LQ+QL  LQSQ+D+LT QA
Sbjct: 78  AYDSISAFSSRRDNQDALFGGEEGLKEIREATVAYKSEALQLQRQLSHLQSQYDMLTSQA 137

Query: 184 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 363
           STL QGRRARVAATS+VNGQLT +DD +SARNLE NAVLGRIASTAQEL+H+HSGDEDGI
Sbjct: 138 STLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGRIASTAQELAHYHSGDEDGI 197

Query: 364 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVA 477
           YL YSDFH YL+GDS+C KELNQWF KQ +TGP+RLVA
Sbjct: 198 YLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVA 235


>ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana]
           gi|110737416|dbj|BAF00652.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008298|gb|AED95681.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 617

 Score =  248 bits (634), Expect = 3e-64
 Identities = 118/158 (74%), Positives = 142/158 (89%)
 Frame = +1

Query: 4   AYDSISVFSSRKDNQDAVFGAGEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 183
           AYDSIS FSSR++NQ+AVFGA E +K++RDATL +K E LELQ+QLR LQ+Q+DLLTGQ+
Sbjct: 78  AYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQS 137

Query: 184 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 363
           S LIQGRRARVAATSAV+GQ+T ++D LSARNL+ N VLGR+AST+QEL+H+HSG+EDGI
Sbjct: 138 SALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGI 197

Query: 364 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVA 477
           YL YSDFH+YL GDSACTKELNQWF KQ +TGP+RLVA
Sbjct: 198 YLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVA 235


>ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp.
           lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein
           ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  248 bits (632), Expect = 5e-64
 Identities = 118/158 (74%), Positives = 142/158 (89%)
 Frame = +1

Query: 4   AYDSISVFSSRKDNQDAVFGAGEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 183
           AYDSIS FSSR++NQ+AVFGA E +K++RDATL +K E LELQ+QLR LQ+Q+DLLTGQ+
Sbjct: 78  AYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQS 137

Query: 184 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 363
           S LIQGRRARVAATSAV+GQ+T ++D LSARNL+ N VLGR+AST+QEL+H+HSG+EDGI
Sbjct: 138 SALIQGRRARVAATSAVSGQITSIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGI 197

Query: 364 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVA 477
           YL YSDFH+YL GDSACTKELNQWF KQ +TGP+RLVA
Sbjct: 198 YLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVA 235


>ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max]
          Length = 618

 Score =  236 bits (601), Expect = 2e-60
 Identities = 116/159 (72%), Positives = 133/159 (83%)
 Frame = +1

Query: 1   FAYDSISVFSSRKDNQDAVFGAGEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQ 180
           FAYDSIS FS R+DNQ+AVFG  EGLKDI++ATL Y+ E L LQ+QLR LQSQFD+L+GQ
Sbjct: 77  FAYDSISAFSDRRDNQEAVFGTEEGLKDIKEATLAYREEALALQRQLRHLQSQFDMLSGQ 136

Query: 181 ASTLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDG 360
           ASTL QGRRAR+AATS VNG L  +DD LS RNL+ N VL RIASTA EL+H+HSGDED 
Sbjct: 137 ASTLTQGRRARLAATSIVNGHLANIDDSLSVRNLQMNGVLERIASTAHELAHYHSGDEDD 196

Query: 361 IYLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVA 477
           IYL YSDF+ +LLGDS+C KELNQWF KQ +TGPFRLVA
Sbjct: 197 IYLAYSDFNQFLLGDSSCLKELNQWFAKQLDTGPFRLVA 235


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