BLASTX nr result

ID: Coptis25_contig00018260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018260
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549791.1| PREDICTED: ABC transporter G family member 3...   187   8e-46
ref|XP_002515560.1| ATP-binding cassette transporter, putative [...   187   8e-46
ref|XP_002324959.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
ref|XP_003524521.1| PREDICTED: ABC transporter G family member 3...   186   2e-45
ref|XP_002284885.1| PREDICTED: ABC transporter G family member 3...   186   2e-45

>ref|XP_003549791.1| PREDICTED: ABC transporter G family member 32-like isoform 1 [Glycine
            max]
          Length = 1418

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/100 (90%), Positives = 98/100 (98%)
 Frame = -3

Query: 301  LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 122
            LPFQPLSM+FSNINYYVDVP+ELKQQGI+ED+LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 810  LPFQPLSMAFSNINYYVDVPLELKQQGIVEDKLQLLVNVTGAFRPGVLTALVGVSGAGKT 869

Query: 121  TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQ 2
            TLMDVLAGRKTGG IEGS+YISGYPK Q++FARISGYCEQ
Sbjct: 870  TLMDVLAGRKTGGVIEGSVYISGYPKRQDSFARISGYCEQ 909


>ref|XP_002515560.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223545504|gb|EEF47009.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1235

 Score =  187 bits (475), Expect = 8e-46
 Identities = 91/100 (91%), Positives = 98/100 (98%)
 Frame = -3

Query: 301  LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 122
            LPFQPLSMSFSNINY+VDVP+ELKQQGI+E++LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 792  LPFQPLSMSFSNINYFVDVPLELKQQGIVEEKLQLLVNVTGAFRPGVLTALVGVSGAGKT 851

Query: 121  TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQ 2
            TLMDVLAGRKTGG IEG+IYISGYPK QETFARISGYCEQ
Sbjct: 852  TLMDVLAGRKTGGVIEGNIYISGYPKRQETFARISGYCEQ 891


>ref|XP_002324959.1| predicted protein [Populus trichocarpa] gi|222866393|gb|EEF03524.1|
            predicted protein [Populus trichocarpa]
          Length = 1420

 Score =  187 bits (475), Expect = 8e-46
 Identities = 91/100 (91%), Positives = 98/100 (98%)
 Frame = -3

Query: 301  LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 122
            LPFQPLSMSFSNINY+VDVP+ELKQQGI+EDRLQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 811  LPFQPLSMSFSNINYFVDVPVELKQQGIVEDRLQLLVNVTGAFRPGVLTALVGVSGAGKT 870

Query: 121  TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQ 2
            TLMDVLAGRKTGG IEG+I+ISGYPK QETFAR+SGYCEQ
Sbjct: 871  TLMDVLAGRKTGGIIEGNIHISGYPKKQETFARVSGYCEQ 910


>ref|XP_003524521.1| PREDICTED: ABC transporter G family member 32-like isoform 1 [Glycine
            max]
          Length = 1418

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/100 (89%), Positives = 98/100 (98%)
 Frame = -3

Query: 301  LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 122
            LPFQPL+M+FSNINYYVDVP+ELKQQGI+ED+LQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 810  LPFQPLAMAFSNINYYVDVPLELKQQGIVEDKLQLLVNVTGAFRPGVLTALVGVSGAGKT 869

Query: 121  TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQ 2
            TLMDVLAGRKTGG IEGS+YISGYPK Q++FARISGYCEQ
Sbjct: 870  TLMDVLAGRKTGGVIEGSVYISGYPKRQDSFARISGYCEQ 909


>ref|XP_002284885.1| PREDICTED: ABC transporter G family member 32 [Vitis vinifera]
            gi|297738886|emb|CBI28131.3| unnamed protein product
            [Vitis vinifera]
          Length = 1421

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -3

Query: 301  LPFQPLSMSFSNINYYVDVPMELKQQGIIEDRLQLLVNVTGAFKPGVLTALVGVSGAGKT 122
            LPFQPLSM F NINY+VDVP+ELKQQGI+EDRLQLLVNVTGAF+PGVLTALVGVSGAGKT
Sbjct: 812  LPFQPLSMCFKNINYFVDVPLELKQQGIVEDRLQLLVNVTGAFRPGVLTALVGVSGAGKT 871

Query: 121  TLMDVLAGRKTGGHIEGSIYISGYPKNQETFARISGYCEQ 2
            TLMDVLAGRKTGG IEGSI+ISGYPK QETFARISGYCEQ
Sbjct: 872  TLMDVLAGRKTGGVIEGSIHISGYPKKQETFARISGYCEQ 911


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