BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018259
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   165   3e-39
ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
gb|ABK26521.1| unknown [Picea sitchensis]                             162   2e-38

>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/136 (57%), Positives = 96/136 (70%)
 Frame = -2

Query: 409 PKVEHYSCMVDTLGRAGLLEEAVSFAESIPGKPNSTLWGALLGACWIHKDAKVGEYVGDR 230
           P V+HY+CMVD LGRAGLLEEAV   E +P  P +++WGALLGAC IH++  + E    +
Sbjct: 505 PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQ 564

Query: 229 LIELEPGDGGVYILLSNIYATVGRWDDARQVRMLMESKSLNKSPGHSTIEIDGTIHEFYV 50
           LIELEPG+ G Y+LLSNIYA  G+WD    +R LM    L K PG S+IE+DG +HEF V
Sbjct: 565 LIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLV 624

Query: 49  GDKSHPRVAEIYLKLD 2
           GD SHP   +IY KLD
Sbjct: 625 GDNSHPSAKKIYAKLD 640


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/136 (57%), Positives = 96/136 (70%)
 Frame = -2

Query: 409 PKVEHYSCMVDTLGRAGLLEEAVSFAESIPGKPNSTLWGALLGACWIHKDAKVGEYVGDR 230
           P V+HY+CMVD LGRAGLLEEAV   E +P  P +++WGALLGAC IH++  + E    +
Sbjct: 384 PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQ 443

Query: 229 LIELEPGDGGVYILLSNIYATVGRWDDARQVRMLMESKSLNKSPGHSTIEIDGTIHEFYV 50
           LIELEPG+ G Y+LLSNIYA  G+WD    +R LM    L K PG S+IE+DG +HEF V
Sbjct: 444 LIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLV 503

Query: 49  GDKSHPRVAEIYLKLD 2
           GD SHP   +IY KLD
Sbjct: 504 GDNSHPSAKKIYAKLD 519


>ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|222867324|gb|EEF04455.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score =  163 bits (413), Expect = 1e-38
 Identities = 70/137 (51%), Positives = 100/137 (72%)
 Frame = -2

Query: 415 IDPKVEHYSCMVDTLGRAGLLEEAVSFAESIPGKPNSTLWGALLGACWIHKDAKVGEYVG 236
           I+  +EHY C++D LGRAG +EEA    + +P +P + +WG+LLGAC +H +  +GE+VG
Sbjct: 347 IEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVG 406

Query: 235 DRLIELEPGDGGVYILLSNIYATVGRWDDARQVRMLMESKSLNKSPGHSTIEIDGTIHEF 56
            RL+E+EP + G Y++LSN+YA+ GRW+D R VR LM  K++ K PG S IE+D TIH F
Sbjct: 407 CRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTF 466

Query: 55  YVGDKSHPRVAEIYLKL 5
           Y  D+SHPR  E++LK+
Sbjct: 467 YASDRSHPRREEVFLKV 483


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/133 (54%), Positives = 97/133 (72%)
 Frame = -2

Query: 415 IDPKVEHYSCMVDTLGRAGLLEEAVSFAESIPGKPNSTLWGALLGACWIHKDAKVGEYVG 236
           ++P++EHY CMVD LGRAG LEEA  F   +P KPN+ +WGALLGAC IHK+A++GE VG
Sbjct: 384 VEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVG 443

Query: 235 DRLIELEPGDGGVYILLSNIYATVGRWDDARQVRMLMESKSLNKSPGHSTIEIDGTIHEF 56
             LI+L P   G Y+LLSNIYA    W+   ++R +M++K L K PGHS IE+DG +H+F
Sbjct: 444 KILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKF 503

Query: 55  YVGDKSHPRVAEI 17
            +GD SHP + +I
Sbjct: 504 TIGDSSHPEMDKI 516


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/138 (52%), Positives = 100/138 (72%)
 Frame = -2

Query: 415 IDPKVEHYSCMVDTLGRAGLLEEAVSFAESIPGKPNSTLWGALLGACWIHKDAKVGEYVG 236
           I PK EHYSCMVD  GRAG L+EA++F   +P +PN+++WG+LLGAC +H + ++ E   
Sbjct: 131 ISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAV 190

Query: 235 DRLIELEPGDGGVYILLSNIYATVGRWDDARQVRMLMESKSLNKSPGHSTIEIDGTIHEF 56
           ++LIEL P + G Y+LLSNIYA  GRWDDA +VR +M+ +S+ K PG S IE+   +H F
Sbjct: 191 EQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPF 250

Query: 55  YVGDKSHPRVAEIYLKLD 2
            VGD SHP++ EIY  L+
Sbjct: 251 IVGDSSHPQIEEIYETLE 268