BLASTX nr result

ID: Coptis25_contig00018234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018234
         (2245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   207   1e-50
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              191   9e-46
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   191   9e-46
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]   189   3e-45
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...   183   2e-43

>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
            gi|9758786|dbj|BAB09084.1| unnamed protein product
            [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
            AT5g47580/MNJ7_17 [Arabidopsis thaliana]
            gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17 [Arabidopsis
            thaliana] gi|332008151|gb|AED95534.1| uncharacterized
            protein [Arabidopsis thaliana]
          Length = 748

 Score =  207 bits (527), Expect = 1e-50
 Identities = 170/601 (28%), Positives = 284/601 (47%), Gaps = 44/601 (7%)
 Frame = -1

Query: 2185 MGTHQCLNGTMIDTGKYSNPVPLIGLYTAASTLVCFVLVICDIWSAFRNKKSCLPCRLFS 2006
            MG   C     ++  ++S P+P IG+Y A ++L+C + +  D+   FR++K   PC+ FS
Sbjct: 1    MGILGCDAHGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFS 60

Query: 2005 LNAITLTLVAIATKLPVDLTTAMPSVQDQLSKLTGTIFICVSMGVLVPSVGTNRESECLA 1826
            LNA +LT +A+  KL VDL T+MPS QDQL+KL+ T+F+C  MG  +PS+G    ++ L 
Sbjct: 61   LNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLM 120

Query: 1825 NLGALTIFVVTIVVNICVQMATGIIFSFIVEHAIILFFMVAXXXXXXXXXXXINVYKG-- 1652
            NL AL I V+T VVNIC+Q+ TG I+ F  EH +++  M+            +   K   
Sbjct: 121  NLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVPTTKRIL 180

Query: 1651 -SANDRNRDLIRKGE--------GSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICM 1499
             S  ++  D+  K            + Q L   ++ A+ SSPQF+  +          C+
Sbjct: 181  ESKYNKRYDVAMKCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTCTASGFFCL 240

Query: 1498 ICSMVLIEVLLRTFAFK--NLDFCDGVSDYGWSMWIVVVSQIVTIFLITVAIGCRWLLFV 1325
            + ++ L E ++R++  +  +L FC G SDY WS  +V+V Q  T+ + T+A   RW   V
Sbjct: 241  LSAITLGEAMVRSYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTTVAIGTIAPAIRWFTAV 300

Query: 1324 ---------QYWVENFAATNGRLFLFSQGSQGVLGISTLLTYIWRFLPFYLRRLPKPFTL 1172
                     +Y+ + F   +     FS+  Q  L +  L    +R      +R      +
Sbjct: 301  NFRCPIRGKKYYRDEFRIESYWTHWFSEKKQHPLSLWILKERRYRKTAHNAKRWILDVCI 360

Query: 1171 ILKYVTTMLAIIIFTLVVALYMPV--VGFSILLAHFRFGYQN----KNEDGMSKNEDGTV 1010
            +++YV      I+F   +  Y+ V  VG  +L  HF     N       +    N     
Sbjct: 361  VIQYV------IVFGSKIIRYISVSCVGKILLCCHFALRTSNTITHSESEKSDSNPSSRQ 414

Query: 1009 DVLNGLLRTQGV-RLTKLVLRNAIKDMERWTEISRMDCP-HLLKLL-STIPLGDSLTVLK 839
            D+ + +L  +G   L  +++R+  +  + W E  R   P +L++LL +T P+      + 
Sbjct: 415  DLASFVLHLEGEDPLVDVMVRSNREATDHWIEKGRKKQPVNLIELLEATTPISKGFEGIA 474

Query: 838  SHYSEKGAS-----EVSCLSM-LVLAEMTKIAMPTSLPVSMDYVLREVFE-------ITC 698
               S K AS       +C ++ LV      +A+P   P S+  +L  V E         C
Sbjct: 475  EFDSNKVASLAHGEPPNCWALPLVTLTSIAVALPDIKPSSLKKLLNAVNEALEYVNKFEC 534

Query: 697  FIDSEFNITSFHNRRKSVMATVLWEGNDRNMPLRHRRVERCMSRMVQSQSDLDDALRVIE 518
             +D+        N RK+  A V+W G D    L H+  +  + ++ + Q + ++ LR + 
Sbjct: 535  VLDTGGESV---NLRKA--AEVVWLGVD----LYHKWFDVDLRKLSKQQRNPEETLRELM 585

Query: 517  E 515
            E
Sbjct: 586  E 586


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  191 bits (484), Expect = 9e-46
 Identities = 98/293 (33%), Positives = 168/293 (57%), Gaps = 17/293 (5%)
 Frame = -1

Query: 2152 IDTGKYSNPVPLIGLYTAASTLVCFVLVICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 1973
            ++   ++ P+P IG+Y AA++LVC + +  D + A R+KK   PC+ FSLNA +LT++A+
Sbjct: 12   VNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAV 71

Query: 1972 ATKLPVDLTTAMPSVQDQLSKLTGTIFICVSMGVLVPSVGTNRESECLANLGALTIFVVT 1793
            ATKL VDL T+MP  QDQLSKL+ T+ +C  MG  +PS+GT    E  +N+ AL I V+T
Sbjct: 72   ATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVIT 131

Query: 1792 IVVNICVQMATGIIFSFIVEHAIILFFMVAXXXXXXXXXXXINV---------------- 1661
            ++VN+C+QM TG+I+ +  EHA+++F M+            +                  
Sbjct: 132  LMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIA 191

Query: 1660 YKGSANDRNRDLIRKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVL 1481
             K S+N+ +  + +K    + + L   ++ A+ S PQF+  +         +C++ + +L
Sbjct: 192  VKESSNETDIPVFKK----LREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAIL 247

Query: 1480 IEVLLRTFAFK-NLDFCDGVSDYGWSMWIVVVSQIVTIFLITVAIGCRWLLFV 1325
            +E  +R++    +  FC G SDY WS+ ++++SQ V + + T+    RW + +
Sbjct: 248  VEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWFVAI 300


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  191 bits (484), Expect = 9e-46
 Identities = 98/293 (33%), Positives = 168/293 (57%), Gaps = 17/293 (5%)
 Frame = -1

Query: 2152 IDTGKYSNPVPLIGLYTAASTLVCFVLVICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 1973
            ++   ++ P+P IG+Y AA++LVC + +  D + A R+KK   PC+ FSLNA +LT++A+
Sbjct: 12   VNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAV 71

Query: 1972 ATKLPVDLTTAMPSVQDQLSKLTGTIFICVSMGVLVPSVGTNRESECLANLGALTIFVVT 1793
            ATKL VDL T+MP  QDQLSKL+ T+ +C  MG  +PS+GT    E  +N+ AL I V+T
Sbjct: 72   ATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVIT 131

Query: 1792 IVVNICVQMATGIIFSFIVEHAIILFFMVAXXXXXXXXXXXINV---------------- 1661
            ++VN+C+QM TG+I+ +  EHA+++F M+            +                  
Sbjct: 132  LMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIA 191

Query: 1660 YKGSANDRNRDLIRKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVL 1481
             K S+N+ +  + +K    + + L   ++ A+ S PQF+  +         +C++ + +L
Sbjct: 192  VKESSNETDIPVFKK----LREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAIL 247

Query: 1480 IEVLLRTFAFK-NLDFCDGVSDYGWSMWIVVVSQIVTIFLITVAIGCRWLLFV 1325
            +E  +R++    +  FC G SDY WS+ ++++SQ V + + T+    RW + +
Sbjct: 248  VEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWFVAI 300


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score =  189 bits (480), Expect = 3e-45
 Identities = 98/293 (33%), Positives = 167/293 (56%), Gaps = 17/293 (5%)
 Frame = -1

Query: 2152 IDTGKYSNPVPLIGLYTAASTLVCFVLVICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 1973
            ++   ++ P+P IG+Y AA++LVC + +  D + A R KK   PC+ FSLNA +LT++A+
Sbjct: 12   VNDSNFNXPMPWIGIYXAAASLVCSLAMGADAFXALRXKKFWFPCKFFSLNATSLTIIAV 71

Query: 1972 ATKLPVDLTTAMPSVQDQLSKLTGTIFICVSMGVLVPSVGTNRESECLANLGALTIFVVT 1793
            ATKL VDL T+MP  QDQLSKL+ T+ +C  MG  +PS+GT    E  +N+ AL I V+T
Sbjct: 72   ATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMENKEVFSNVIALGILVIT 131

Query: 1792 IVVNICVQMATGIIFSFIVEHAIILFFMVAXXXXXXXXXXXINV---------------- 1661
            ++VN+C+QM TG+I+ +  EHA+++F M+            +                  
Sbjct: 132  LMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIA 191

Query: 1660 YKGSANDRNRDLIRKGEGSMLQRLKICFLYAYQSSPQFIACKIPFHDVVSMICMICSMVL 1481
             K S+N+ +  + +K    + + L   ++ A+ S PQF+  +         +C++ + +L
Sbjct: 192  VKESSNETDIPVFKK----LREDLMKYWIMAHSSXPQFVIGRSVTCTASGALCLLSAAIL 247

Query: 1480 IEVLLRTFAFK-NLDFCDGVSDYGWSMWIVVVSQIVTIFLITVAIGCRWLLFV 1325
            +E  +R++    +  FC G SDY WS+ ++++SQ V + + T+    RW + +
Sbjct: 248  VEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWFVAI 300


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score =  183 bits (464), Expect = 2e-43
 Identities = 98/304 (32%), Positives = 165/304 (54%), Gaps = 16/304 (5%)
 Frame = -1

Query: 2170 CLNGTMIDTGKYSNPVPLIGLYTAASTLVCFVLVICDIWSAFRNKKSCLPCRLFSLNAIT 1991
            C +   +D  K+S P+P IG+Y AA++L C + +  D+    R +K   PC+ F LNA +
Sbjct: 6    CSSDGHMDDTKFSKPMPWIGIYIAAASLACLIAMAADLIHGIRGRKLWFPCKFFCLNATS 65

Query: 1990 LTLVAIATKLPVDLTTAMPSVQDQLSKLTGTIFICVSMGVLVPSVGTNRESECLANLGAL 1811
            L ++A+A KL VDL T MP   DQLSKL+ +  IC  M   +P++G     + + N  A+
Sbjct: 66   LAIIAVAVKLSVDLNTPMPHRHDQLSKLSSSALICTIMANSMPTLGITENKDTMMNFMAM 125

Query: 1810 TIFVVTIVVNICVQMATGIIFSFIVEHAIILFFM---VAXXXXXXXXXXXINVYKGSAND 1640
             I V+T++VNIC+Q  TG+I+ F VEHA+I+  M   +            +  Y      
Sbjct: 126  AILVITMIVNICIQFVTGVIYLFWVEHAVIMLIMLILLMTMASSAISLPKMKHYFELKYK 185

Query: 1639 RNRDLIRKG------EGSML------QRLKICFLYAYQSSPQFIACKIPFHDVVSMICMI 1496
             N + +++G      EG+ +      Q +KI ++ A+ SSPQF+  +          C++
Sbjct: 186  MNEEALKEGSKLLGEEGNQMVNRLRDQLMKI-WMMAHTSSPQFVLGRSVTGTASGAFCLL 244

Query: 1495 CSMVLIEVLLRTFAFK-NLDFCDGVSDYGWSMWIVVVSQIVTIFLITVAIGCRWLLFVQY 1319
             ++ L+E +LR++    + DFC G +DY WS+ ++++ Q+  + + T+A   RW + + Y
Sbjct: 245  STLTLVEAMLRSYLMPWSFDFCTGDTDYKWSIILILIVQVAAVVVGTIAPAFRWFIAITY 304

Query: 1318 WVEN 1307
               N
Sbjct: 305  KCPN 308


Top