BLASTX nr result

ID: Coptis25_contig00018232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018232
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   399   e-109
ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]   369   e-100
ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   360   4e-97
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   345   1e-92

>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  399 bits (1025), Expect = e-109
 Identities = 194/343 (56%), Positives = 248/343 (72%)
 Frame = -1

Query: 1037 LLNVARTLSLFGFPWNKLGKLYREEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAF 858
            +LN A  LS FGFPWNKLG LY+ E  IF KD +DL   LCR+   G    +V+GICLAF
Sbjct: 135  ILNAAGALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAF 194

Query: 857  PFVLSGNDHLSIGVDALFGVLKRVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMND 678
            PFVL G   L +   ALF  LKRVFVDFDL S V+ NVDA YE CRKI++F DLGCE   
Sbjct: 195  PFVLGGKGDLGVEAGALFDDLKRVFVDFDLGSFVEENVDAWYEICRKIRLFYDLGCEKGK 254

Query: 677  VGEFIGKRWDVFLECSEEVLVTKVEYFKRMNIKKEDVGLFLLCCPEVLQFDLESPVFSAM 498
            +GE +G+  ++FLE SEEVLV K+++F R+N++K  +GL LL CPE+L FDLE+PV S M
Sbjct: 255  IGELMGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAPVISVM 314

Query: 497  KFLKHFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADL 318
             FLKHFGL  ++  ++A  YPYVLG+N++ANLPH MRA+D HEWFF  + NGNH LL + 
Sbjct: 315  GFLKHFGLGLQKSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNY 374

Query: 317  GIDSQDEDFEKDFKDCLERFQSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSE 138
             +   DED ++D++  LE+ QS R+  H + KL+FLH IG+GENL+T+KVL ++HGT SE
Sbjct: 375  VLSHPDEDLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSE 434

Query: 137  LQVRFNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFL 9
            LQ RFN LL  G+ FS+L  MI    K+LNQKPE+L+ KV+FL
Sbjct: 435  LQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFL 477


>ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|222835189|gb|EEE73624.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  372 bits (954), Expect = e-100
 Identities = 186/343 (54%), Positives = 241/343 (70%)
 Frame = -1

Query: 1034 LNVARTLSLFGFPWNKLGKLYREEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFP 855
            +NV+  L  FGFPWNKLG LY+EE  +F     ++ S LC      F T +V+GI LAFP
Sbjct: 135  INVSCVLCDFGFPWNKLGMLYKEEKRVFSMSEEEVKSRLCGLKGFRFSTTSVIGISLAFP 194

Query: 854  FVLSGNDHLSIGVDALFGVLKRVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDV 675
            FVL G   LS  + ALF  LKRVFVDFDL+S V+GNVDA YE CRKI+VF DLGCE   V
Sbjct: 195  FVLRGE--LSGEIGALFDDLKRVFVDFDLESCVEGNVDAWYEVCRKIRVFYDLGCEKGKV 252

Query: 674  GEFIGKRWDVFLECSEEVLVTKVEYFKRMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMK 495
            GE +GK   +F++   EVLV K E+F +  ++KEDVGL LL  P +L F LE  V S   
Sbjct: 253  GELMGKSKRIFVDYPVEVLVQKAEFFCKFGVRKEDVGLLLLTKPGILDFQLEGQVISVKG 312

Query: 494  FLKHFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLG 315
             LKHFGLS EEL ++A  Y +V G+N++ANLPH MRA++ HEWFF+KI +GNH LLA   
Sbjct: 313  LLKHFGLSAEELKSVAQNYGHVFGRNKMANLPHVMRAMELHEWFFNKIKDGNHQLLASYV 372

Query: 314  IDSQDEDFEKDFKDCLERFQSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSEL 135
            +   DED ++ ++D LER Q  R+  H + KL+FLH IGFGEN +T+KVL++LHGT SEL
Sbjct: 373  MSDPDEDLDEKYRDSLERIQCTRTPMHTMNKLEFLHAIGFGENALTIKVLTDLHGTSSEL 432

Query: 134  QVRFNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLC 6
            Q R + LL  G+ FS+L  MI+M+PK+L+QKPE+L+ K+++LC
Sbjct: 433  QERVDCLLRYGIVFSKLCSMIRMMPKILSQKPEILQQKLNYLC 475


>emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
          Length = 545

 Score =  369 bits (948), Expect = e-100
 Identities = 183/343 (53%), Positives = 237/343 (69%)
 Frame = -1

Query: 1037 LLNVARTLSLFGFPWNKLGKLYREEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAF 858
            +LN A  LS FGFPWNKLG LY+ E  IF KD +DL   LCR+   G    +V+GICLAF
Sbjct: 135  ILNAAGALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAF 194

Query: 857  PFVLSGNDHLSIGVDALFGVLKRVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMND 678
            PFVL G   L +   ALF  LKRVFV+FDL S V+ NVDA YE CRKI++F DLGCE   
Sbjct: 195  PFVLGGKGDLGVEAGALFDDLKRVFVBFDLGSFVEENVDAWYEICRKIRLFYDLGCEKGK 254

Query: 677  VGEFIGKRWDVFLECSEEVLVTKVEYFKRMNIKKEDVGLFLLCCPEVLQFDLESPVFSAM 498
            +GE +G+  ++FLE SEEVLV K+++F R+N++K  +GL LL CPE+L FDLE+P     
Sbjct: 255  IGELMGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAP----- 309

Query: 497  KFLKHFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADL 318
                       +  ++A  YPYVLG+N++ANLPH MRA+D HEWFF  + NGNH LL + 
Sbjct: 310  -----------KSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNY 358

Query: 317  GIDSQDEDFEKDFKDCLERFQSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSE 138
             +   DED ++D++  LE+ QS R+  H + KL+FLH IG+GENL+T+KVL ++HGT SE
Sbjct: 359  VLSHPDEDLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSE 418

Query: 137  LQVRFNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFL 9
            LQ RFN LL  G+ FS+L  MI    K+LNQKPE+L+ KV+FL
Sbjct: 419  LQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFL 461


>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
            gi|223548791|gb|EEF50280.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  360 bits (923), Expect = 4e-97
 Identities = 177/343 (51%), Positives = 240/343 (69%)
 Frame = -1

Query: 1034 LNVARTLSLFGFPWNKLGKLYREEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFP 855
            L+ A  L+ FGFPW KLG LY+E+  IF +D  +L S L  +   GF   +V+GICLAFP
Sbjct: 128  LDAACALASFGFPWYKLGTLYKEDSSIFSRDPLELKSRLSGFKECGFSNTSVIGICLAFP 187

Query: 854  FVLSGNDHLSIGVDALFGVLKRVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDV 675
             VLSG+  L   +DALF  LKR F+DF++ S V G+VDA Y+ C KI+VF DLG     V
Sbjct: 188  HVLSGD--LGGEIDALFDDLKRAFIDFNMGSCVQGHVDAWYDICLKIRVFYDLGLNKGKV 245

Query: 674  GEFIGKRWDVFLECSEEVLVTKVEYFKRMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMK 495
            G+ IGK   +F++C  EVL+ K EYF R  + K DVG+ LL  PE+L FDLE+P+ S   
Sbjct: 246  GDIIGKSKTIFIDCPIEVLIKKTEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKG 305

Query: 494  FLKHFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLG 315
             L+HFG + EEL+ +  +YP+V+G+N++ANLPH MRA+D H WFF+KI +G H LLA   
Sbjct: 306  ILEHFGFNVEELEVVIHKYPHVMGRNKMANLPHVMRAMDLHLWFFNKIKDGYHELLASYA 365

Query: 314  IDSQDEDFEKDFKDCLERFQSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSEL 135
            +   DED +K+F D LER +  R+  H ++KLDF+H IGFGEN +T+KVL++LHG+ SEL
Sbjct: 366  LRDPDEDLDKEFSDSLERIRVSRTPTHTMSKLDFVHGIGFGENALTVKVLTHLHGSSSEL 425

Query: 134  QVRFNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLC 6
            Q RF+ LL  G+ FS+L  MI+ +PK+LNQ+ E+L+ KV+FLC
Sbjct: 426  QERFDCLLRLGIGFSKLCTMIRTMPKILNQQSEILEQKVNFLC 468


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
            lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
            ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  345 bits (885), Expect = 1e-92
 Identities = 171/344 (49%), Positives = 231/344 (67%)
 Frame = -1

Query: 1037 LLNVARTLSLFGFPWNKLGKLYREEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAF 858
            +L+ A  LS FGFPWNKLGKLY+EE  +F +   ++DS L ++  LGF T  V+G CLAF
Sbjct: 128  VLDAACALSGFGFPWNKLGKLYKEERLVFVQSPGEIDSRLLKFKDLGFSTVAVIGTCLAF 187

Query: 857  PFVLSGNDHLSIGVDALFGVLKRVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMND 678
            P  L G   L   +  LF  LKR+F +FD +   + NVD+     RKI+VF DLGCE  +
Sbjct: 188  PHALCGGGELGSEILCLFVKLKRLFDEFDSQHLCEENVDSWLAVSRKIRVFYDLGCENEE 247

Query: 677  VGEFIGKRWDVFLECSEEVLVTKVEYFKRMNIKKEDVGLFLLCCPEVLQFDLESPVFSAM 498
            + E +G+   +FLE SEE LV K EYF R  ++KEDV L +L  P ++ FDLE PV S  
Sbjct: 248  MWELMGRNKSLFLEYSEEALVKKAEYFCRFGVRKEDVALLILRNPAIMNFDLEKPVISVT 307

Query: 497  KFLKHFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADL 318
              LKHFGL  +E+DA+A +YPYVLG+N+L NLP+ +RAID HE   D + NG+HHLLA  
Sbjct: 308  GMLKHFGLRQDEVDAVAQKYPYVLGRNKLKNLPYVLRAIDLHERIVDILKNGSHHLLASY 367

Query: 317  GIDSQDEDFEKDFKDCLERFQSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSE 138
             +    ED ++++++ LE  Q+ R+  H + KLDFLHEIGFGEN +T+KVL ++HGT  E
Sbjct: 368  SVMDPYEDLDREYQEGLEELQNSRTKTHNIQKLDFLHEIGFGENGMTMKVLQHVHGTAVE 427

Query: 137  LQVRFNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLC 6
            LQ RF  LL  G+ FS++  +I+  PK+LNQKP  ++DK+ FLC
Sbjct: 428  LQDRFQILLDSGIIFSKICLLIRSAPKILNQKPHSIQDKLRFLC 471


Top