BLASTX nr result
ID: Coptis25_contig00018224
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018224 (227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2... 105 4e-21 ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [... 101 6e-20 ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19 ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi... 96 2e-18 ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co... 87 1e-15 >ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1| predicted protein [Populus trichocarpa] Length = 811 Score = 105 bits (262), Expect = 4e-21 Identities = 48/73 (65%), Positives = 60/73 (82%) Frame = -2 Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47 SISGI+LPCSFPE+Y GLR G+ FD +AGLV + TE+Y IQ YSL D+R IS++QVCER+ Sbjct: 360 SISGIKLPCSFPEMYNGLRSGIAFDRNAGLVALPTENYCIQLYSLLDDRGISEVQVCERN 419 Query: 46 HQADDEVTLVLAL 8 HQ DEVT+V+ L Sbjct: 420 HQPGDEVTVVVTL 432 >ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera] gi|296087114|emb|CBI33488.3| unnamed protein product [Vitis vinifera] Length = 815 Score = 101 bits (252), Expect = 6e-20 Identities = 46/73 (63%), Positives = 59/73 (80%) Frame = -2 Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47 SISGI+LPCSFPEIY GL +FD +AGLV +TE+Y IQFYSLFD+RE ++Q+CER+ Sbjct: 358 SISGIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYSLFDDRENFEVQICERN 417 Query: 46 HQADDEVTLVLAL 8 HQ D+VT+V+ L Sbjct: 418 HQPSDDVTVVVTL 430 >ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1| predicted protein [Populus trichocarpa] Length = 812 Score = 99.8 bits (247), Expect = 2e-19 Identities = 46/73 (63%), Positives = 60/73 (82%) Frame = -2 Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47 SISGI+LPCSFPE+ GL+ G+ FD +AGLV ++TE+Y IQ YSLFD+R IS++ VCER+ Sbjct: 360 SISGIKLPCSFPEMCNGLQSGIAFDCNAGLVALRTENYCIQLYSLFDDRGISEVVVCERN 419 Query: 46 HQADDEVTLVLAL 8 HQ DEVT+V+ L Sbjct: 420 HQPGDEVTVVVTL 432 >ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi|223526967|gb|EEF29164.1| wd40 protein, putative [Ricinus communis] Length = 807 Score = 96.3 bits (238), Expect = 2e-18 Identities = 46/75 (61%), Positives = 60/75 (80%) Frame = -2 Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47 SISGI+LPCSFP++ GV FD ++GLV V+TE+Y IQ YSLFD+R IS++QVCER+ Sbjct: 356 SISGIKLPCSFPKMSKVSFSGVAFDRTSGLVAVRTENYCIQLYSLFDDRGISEVQVCERN 415 Query: 46 HQADDEVTLVLALTA 2 +Q DE+TLV+AL A Sbjct: 416 YQPSDEITLVVALVA 430 >ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 75-like [Cucumis sativus] Length = 810 Score = 87.4 bits (215), Expect = 1e-15 Identities = 38/71 (53%), Positives = 56/71 (78%) Frame = -2 Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47 SISGI+LPCSFP++ G G F+ + GLV +++E+YSIQFYSLFD+ I ++Q+CER+ Sbjct: 359 SISGIKLPCSFPDVCQGSNNGFAFNQNDGLVALRSENYSIQFYSLFDDCGICEVQICERN 418 Query: 46 HQADDEVTLVL 14 HQ +E+T+V+ Sbjct: 419 HQPGEELTVVI 429