BLASTX nr result

ID: Coptis25_contig00018224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018224
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   101   6e-20
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...    96   2e-18
ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...    87   1e-15

>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/73 (65%), Positives = 60/73 (82%)
 Frame = -2

Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47
           SISGI+LPCSFPE+Y GLR G+ FD +AGLV + TE+Y IQ YSL D+R IS++QVCER+
Sbjct: 360 SISGIKLPCSFPEMYNGLRSGIAFDRNAGLVALPTENYCIQLYSLLDDRGISEVQVCERN 419

Query: 46  HQADDEVTLVLAL 8
           HQ  DEVT+V+ L
Sbjct: 420 HQPGDEVTVVVTL 432


>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = -2

Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47
           SISGI+LPCSFPEIY GL    +FD +AGLV  +TE+Y IQFYSLFD+RE  ++Q+CER+
Sbjct: 358 SISGIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYSLFDDRENFEVQICERN 417

Query: 46  HQADDEVTLVLAL 8
           HQ  D+VT+V+ L
Sbjct: 418 HQPSDDVTVVVTL 430


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
           predicted protein [Populus trichocarpa]
          Length = 812

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = -2

Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47
           SISGI+LPCSFPE+  GL+ G+ FD +AGLV ++TE+Y IQ YSLFD+R IS++ VCER+
Sbjct: 360 SISGIKLPCSFPEMCNGLQSGIAFDCNAGLVALRTENYCIQLYSLFDDRGISEVVVCERN 419

Query: 46  HQADDEVTLVLAL 8
           HQ  DEVT+V+ L
Sbjct: 420 HQPGDEVTVVVTL 432


>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/75 (61%), Positives = 60/75 (80%)
 Frame = -2

Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47
           SISGI+LPCSFP++      GV FD ++GLV V+TE+Y IQ YSLFD+R IS++QVCER+
Sbjct: 356 SISGIKLPCSFPKMSKVSFSGVAFDRTSGLVAVRTENYCIQLYSLFDDRGISEVQVCERN 415

Query: 46  HQADDEVTLVLALTA 2
           +Q  DE+TLV+AL A
Sbjct: 416 YQPSDEITLVVALVA 430


>ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           75-like [Cucumis sativus]
          Length = 810

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/71 (53%), Positives = 56/71 (78%)
 Frame = -2

Query: 226 SISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNREISQIQVCERS 47
           SISGI+LPCSFP++  G   G  F+ + GLV +++E+YSIQFYSLFD+  I ++Q+CER+
Sbjct: 359 SISGIKLPCSFPDVCQGSNNGFAFNQNDGLVALRSENYSIQFYSLFDDCGICEVQICERN 418

Query: 46  HQADDEVTLVL 14
           HQ  +E+T+V+
Sbjct: 419 HQPGEELTVVI 429


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