BLASTX nr result

ID: Coptis25_contig00018213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018213
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308731.1| predicted protein [Populus trichocarpa] gi|2...   155   9e-36
ref|XP_002265487.2| PREDICTED: uncharacterized protein LOC100243...   155   2e-35
emb|CBI17355.3| unnamed protein product [Vitis vinifera]              155   2e-35
ref|XP_002525246.1| expressed protein, putative [Ricinus communi...   155   2e-35
gb|AFK40447.1| unknown [Lotus japonicus]                              146   7e-33

>ref|XP_002308731.1| predicted protein [Populus trichocarpa] gi|222854707|gb|EEE92254.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  155 bits (393), Expect = 9e-36
 Identities = 93/186 (50%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
 Frame = +1

Query: 7   SKGVERS-RG-SHRSEGYDASKGVERKRRSYHHSSRNNEPYSHNRRTDSETEENKKRSYE 180
           SK  ERS RG SH   G +  +   RK    +H    NE YS   RTD + +  K R   
Sbjct: 291 SKYRERSPRGYSHPKAGKNDGQDTHRK----NHGKSMNERYSLEGRTDFDADR-KGRDAN 345

Query: 181 NSRDERHSTQIMEAPMGNNERSHQRPQRTVTKLSEEEKAARLREMEMDAELHEQQRWKRL 360
           +SR+ R           +N +     +   +KL+EEE+ A+LREM++DAELHE+QRWKRL
Sbjct: 346 SSREARSYASSESVRYDSNYKR----RNVASKLTEEERLAKLREMQVDAELHEEQRWKRL 401

Query: 361 KTASENDAREASQANSRSGSNFLDAAQKSVFGAEKGGSSTIEESVRRRKYYSQGQSEAYE 540
           + A E+DAREA+  +   G NFLDAA KSV+GAEKGGSSTIEESVRRR +YSQG++E  +
Sbjct: 402 RKAEEDDAREATHTSMLGGRNFLDAAHKSVYGAEKGGSSTIEESVRRRAHYSQGRTEVGD 461

Query: 541 GNAFRR 558
           GNAFRR
Sbjct: 462 GNAFRR 467


>ref|XP_002265487.2| PREDICTED: uncharacterized protein LOC100243706 [Vitis vinifera]
          Length = 621

 Score =  155 bits (391), Expect = 2e-35
 Identities = 82/151 (54%), Positives = 101/151 (66%)
 Frame = +1

Query: 106 RNNEPYSHNRRTDSETEENKKRSYENSRDERHSTQIMEAPMGNNERSHQRPQRTVTKLSE 285
           +N E   H++ +  E + N     E    +       ++P  N   SH R + T  KLSE
Sbjct: 472 KNREKSKHDKYSSGERKNNVASREETGSKKFSQASHSDSP-ANRHESHYRRRNTAPKLSE 530

Query: 286 EEKAARLREMEMDAELHEQQRWKRLKTASENDAREASQANSRSGSNFLDAAQKSVFGAEK 465
           EE+AARLREM+MD ELHE+QR KRL+ A ENDA+EA+QA    G +FLDA  KSV+GAEK
Sbjct: 531 EERAARLREMQMDVELHEEQRRKRLRKAEENDAQEATQAGISQGRDFLDATHKSVYGAEK 590

Query: 466 GGSSTIEESVRRRKYYSQGQSEAYEGNAFRR 558
           GGSSTIEESVRRR +Y QG+SE  EGNAFRR
Sbjct: 591 GGSSTIEESVRRRTHYLQGRSEVGEGNAFRR 621


>emb|CBI17355.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  155 bits (391), Expect = 2e-35
 Identities = 82/151 (54%), Positives = 101/151 (66%)
 Frame = +1

Query: 106 RNNEPYSHNRRTDSETEENKKRSYENSRDERHSTQIMEAPMGNNERSHQRPQRTVTKLSE 285
           +N E   H++ +  E + N     E    +       ++P  N   SH R + T  KLSE
Sbjct: 419 KNREKSKHDKYSSGERKNNVASREETGSKKFSQASHSDSP-ANRHESHYRRRNTAPKLSE 477

Query: 286 EEKAARLREMEMDAELHEQQRWKRLKTASENDAREASQANSRSGSNFLDAAQKSVFGAEK 465
           EE+AARLREM+MD ELHE+QR KRL+ A ENDA+EA+QA    G +FLDA  KSV+GAEK
Sbjct: 478 EERAARLREMQMDVELHEEQRRKRLRKAEENDAQEATQAGISQGRDFLDATHKSVYGAEK 537

Query: 466 GGSSTIEESVRRRKYYSQGQSEAYEGNAFRR 558
           GGSSTIEESVRRR +Y QG+SE  EGNAFRR
Sbjct: 538 GGSSTIEESVRRRTHYLQGRSEVGEGNAFRR 568


>ref|XP_002525246.1| expressed protein, putative [Ricinus communis]
           gi|223535543|gb|EEF37212.1| expressed protein, putative
           [Ricinus communis]
          Length = 444

 Score =  155 bits (391), Expect = 2e-35
 Identities = 87/178 (48%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
 Frame = +1

Query: 40  RSEGYDASKGVERKRRSYHHSSRNN-EPYSHNR----RTDSETEENKKRSYENSRDERHS 204
           +++G DA K    K +S  HS     +P  H R    R+ ++  E + RS+  ++    S
Sbjct: 274 KNDGQDAVKKKHDKFKSEKHSIEAQIDPDGHRRGRVHRSFTDKHERETRSFSEAKSYYSS 333

Query: 205 TQIMEAPMGNNERSHQRPQRTVTKLSEEEKAARLREMEMDAELHEQQRWKRLKTASENDA 384
                        SH + +    KLSEEE+AA+LREM++DAELHE+QRWKRL+ A E+D 
Sbjct: 334 GAACHD-------SHHKRRSVAPKLSEEERAAKLREMQVDAELHEEQRWKRLRKAEEDDV 386

Query: 385 REASQANSRSGSNFLDAAQKSVFGAEKGGSSTIEESVRRRKYYSQGQSEAYEGNAFRR 558
           REA+ ++   G NFLDAAQ+SV+G EKGGSSTIEESVRRR +YSQG+SEA  GNAFRR
Sbjct: 387 REATHSSISGGRNFLDAAQRSVYGTEKGGSSTIEESVRRRAHYSQGRSEAGHGNAFRR 444


>gb|AFK40447.1| unknown [Lotus japonicus]
          Length = 421

 Score =  146 bits (368), Expect = 7e-33
 Identities = 87/192 (45%), Positives = 117/192 (60%), Gaps = 23/192 (11%)
 Frame = +1

Query: 52  YDASKGVERKRRSYHHSS---RNNEPYSHNRRTDSET--EENKKRSYENSRD-ERHSTQI 213
           Y++S+G ERKRR  H+     R   P  H R+ + +   E+   R+Y  S+        I
Sbjct: 232 YESSEG-ERKRRKNHYEDTKYRERPPSHHQRQRNVKDYKEDADDRNYNKSKPGNSEGRSI 290

Query: 214 MEAPMGNN-----------------ERSHQRPQRTVTKLSEEEKAARLREMEMDAELHEQ 342
           ++AP   N                   SH + +    KLSEEE+AA+LR+M++ AELHE+
Sbjct: 291 IDAPRRGNVSFPEPSSTRSSGTSLGHGSHYKRRNAAPKLSEEERAAKLRQMQLAAELHEE 350

Query: 343 QRWKRLKTASENDAREASQANSRSGSNFLDAAQKSVFGAEKGGSSTIEESVRRRKYYSQG 522
           QRWKR+K A E DA+EA+Q +   G NFLD AQKS++GA +GGSS+I ESVRRR +YSQG
Sbjct: 351 QRWKRIKKAEETDAQEATQNSKSGGKNFLDTAQKSIYGAAEGGSSSIAESVRRRTHYSQG 410

Query: 523 QSEAYEGNAFRR 558
           +S A EGNAFRR
Sbjct: 411 RS-AGEGNAFRR 421


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