BLASTX nr result
ID: Coptis25_contig00018202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00018202 (745 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257... 61 3e-07 ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808... 58 2e-06 ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|2... 56 7e-06 >ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257848 [Vitis vinifera] Length = 266 Score = 60.8 bits (146), Expect = 3e-07 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Frame = -2 Query: 309 LLRTLLHKKIYPQKSS-TILVKKYLGDRHSSKNNKDDQ*EEKRDTGCKWVNTDSK 148 +LR LLHKKIYPQ SS T+ + +YL +RH K++ +D+ EK G KWV TDS+ Sbjct: 206 ILRLLLHKKIYPQSSSSTLSIMRYLANRHMPKSDNEDEVNEKVTEGSKWVKTDSE 260 >ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808146 [Glycine max] Length = 263 Score = 58.2 bits (139), Expect = 2e-06 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Frame = -2 Query: 309 LLRTLLHKKIYPQKSS-TILVKKYLGDRHSSKNNKDDQ*EEKRDTGCKWVNTDSK 148 LLRT+LHKKIY Q SS + LVKK + D+ ++ +D+ +E+ GCKWV TDS+ Sbjct: 203 LLRTMLHKKIYTQNSSRSPLVKKGIEDKKMTRKRNEDESDERNGDGCKWVKTDSE 257 >ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|222873301|gb|EEF10432.1| predicted protein [Populus trichocarpa] Length = 312 Score = 56.2 bits (134), Expect = 7e-06 Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 7/109 (6%) Frame = -2 Query: 309 LLRTLLHKKIYPQKSST-ILVKKYLGDRHSSKNNK-DDQ*EEKRDTGCKWVNTDSKSKVF 136 LLRTLLHKKI PQ +S +KKY+ D+ SK K DD+ + K G KWV TDS+ K F Sbjct: 209 LLRTLLHKKINPQSTSRPSSMKKYIEDKKISKKEKEDDEKQYKTSDGSKWVKTDSECK-F 267 Query: 135 LLHLL-----IAYIMISVEMLLT*REKIYTFKFK*HCFRFVSADIVLEI 4 + LL YI I + + + ++ I F+ ADIVLEI Sbjct: 268 IFSLLGCPNIYIYIYIYIYIYIYNQDPIDILT---RSCSFI-ADIVLEI 312