BLASTX nr result

ID: Coptis25_contig00018200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018200
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279746.2| PREDICTED: 1-aminocyclopropane-1-carboxylate...   478   e-132
emb|CBI27928.3| unnamed protein product [Vitis vinifera] gi|4084...   472   e-131
gb|AAX84675.1| ACC oxidase ACCO2 [Manihot esculenta]                  464   e-128
dbj|BAG15873.1| ACC oxidase [Bruguiera gymnorhiza]                    459   e-127
ref|XP_002514144.1| 1-aminocyclopropane-1-carboxylate oxidase, p...   456   e-126

>ref|XP_002279746.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1 [Vitis
            vinifera]
          Length = 329

 Score =  478 bits (1230), Expect = e-132
 Identities = 230/315 (73%), Positives = 264/315 (83%), Gaps = 2/315 (0%)
 Frame = -2

Query: 1154 LFQS--VRKKNMEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGINVELMEKVK 981
            LF S  VRK+ ME+P+ID + L+G+   +T  LLHQACEKWGFF++ NHG++ +LMEKVK
Sbjct: 13   LFSSSWVRKQEMEVPMIDFDKLDGEKRAETKALLHQACEKWGFFQIDNHGVDKKLMEKVK 72

Query: 980  RLVNMHYEEYMKESFYGSDIVKGLQSKEAIREKDWESSFFIWHRPTSNLHEFTNFSEDLC 801
             LVN HYEE MK SFY S+I K L+ KE     DWESSFF+WHRPTSN+ EFTN SEDL 
Sbjct: 73   HLVNTHYEEIMKRSFYESEIAKALEDKETASNIDWESSFFLWHRPTSNIDEFTNISEDLR 132

Query: 800  KAMDEYINQVYKLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELV 621
            K MDEYI Q++KLAEKLSELMCENLGLEK YI++AFSG  GPSVGTKVAKYP+CP+PELV
Sbjct: 133  KTMDEYIAQLFKLAEKLSELMCENLGLEKGYIREAFSGNAGPSVGTKVAKYPQCPRPELV 192

Query: 620  KGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILTNGRYK 441
            +GLR HTDAGGIILLLQDDQVPGLEF+KDG+WV IPPS NNTIF+NTGDQ+E+L+NGRYK
Sbjct: 193  RGLREHTDAGGIILLLQDDQVPGLEFYKDGEWVVIPPSKNNTIFVNTGDQIEVLSNGRYK 252

Query: 440  SVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKST 261
            S LHRVMAD+NGSRLSIATFYNP GDAIISPAP+LLYP    FQDYLKLYATTKF DK  
Sbjct: 253  STLHRVMADKNGSRLSIATFYNPSGDAIISPAPKLLYPDHFRFQDYLKLYATTKFADKGP 312

Query: 260  RFKSLKKIAGGQAKL 216
            RF+S+K +A G   L
Sbjct: 313  RFESMKNMAIGHHSL 327


>emb|CBI27928.3| unnamed protein product [Vitis vinifera] gi|408451524|gb|AFU66006.1|
            1-aminocyclopropane-1-carboxylic acid oxidase 3 [Vitis
            vinifera]
          Length = 306

 Score =  472 bits (1214), Expect = e-131
 Identities = 224/304 (73%), Positives = 257/304 (84%)
 Frame = -2

Query: 1127 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGINVELMEKVKRLVNMHYEEYM 948
            ME+P+ID + L+G+   +T  LLHQACEKWGFF++ NHG++ +LMEKVK LVN HYEE M
Sbjct: 1    MEVPMIDFDKLDGEKRAETKALLHQACEKWGFFQIDNHGVDKKLMEKVKHLVNTHYEEIM 60

Query: 947  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHRPTSNLHEFTNFSEDLCKAMDEYINQVY 768
            K SFY S+I K L+ KE     DWESSFF+WHRPTSN+ EFTN SEDL K MDEYI Q++
Sbjct: 61   KRSFYESEIAKALEDKETASNIDWESSFFLWHRPTSNIDEFTNISEDLRKTMDEYIAQLF 120

Query: 767  KLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELVKGLRAHTDAGG 588
            KLAEKLSELMCENLGLEK YI++AFSG  GPSVGTKVAKYP+CP+PELV+GLR HTDAGG
Sbjct: 121  KLAEKLSELMCENLGLEKGYIREAFSGNAGPSVGTKVAKYPQCPRPELVRGLREHTDAGG 180

Query: 587  IILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILTNGRYKSVLHRVMADEN 408
            IILLLQDDQVPGLEF+KDG+WV IPPS NNTIF+NTGDQ+E+L+NGRYKS LHRVMAD+N
Sbjct: 181  IILLLQDDQVPGLEFYKDGEWVVIPPSKNNTIFVNTGDQIEVLSNGRYKSTLHRVMADKN 240

Query: 407  GSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKSTRFKSLKKIAGG 228
            GSRLSIATFYNP GDAIISPAP+LLYP    FQDYLKLYATTKF DK  RF+S+K +A G
Sbjct: 241  GSRLSIATFYNPSGDAIISPAPKLLYPDHFRFQDYLKLYATTKFADKGPRFESMKNMAIG 300

Query: 227  QAKL 216
               L
Sbjct: 301  HHSL 304


>gb|AAX84675.1| ACC oxidase ACCO2 [Manihot esculenta]
          Length = 306

 Score =  464 bits (1194), Expect = e-128
 Identities = 224/306 (73%), Positives = 254/306 (83%)
 Frame = -2

Query: 1127 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGINVELMEKVKRLVNMHYEEYM 948
            MEIPVID   LNG+  +K M LLH+ACEKWGFF+V NHGI+  LMEKVK+LVN HYEE +
Sbjct: 1    MEIPVIDFSELNGENRSKMMGLLHEACEKWGFFQVENHGIDKSLMEKVKQLVNFHYEENL 60

Query: 947  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHRPTSNLHEFTNFSEDLCKAMDEYINQVY 768
            +ESFY S I K L +     + DWESS+FIWHRPTSN+ E  N  ++ CK MDEYI Q+ 
Sbjct: 61   EESFYASAIAKRLNNPGNTSDIDWESSYFIWHRPTSNISEIPNLPQEFCKWMDEYITQLI 120

Query: 767  KLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELVKGLRAHTDAGG 588
            KLAEK+SEL+ ENLGLEKD+IK+ F G RGPSVGTKVAKYP+CPQPELV+GLR HTDAGG
Sbjct: 121  KLAEKISELISENLGLEKDHIKEVFKGDRGPSVGTKVAKYPKCPQPELVRGLREHTDAGG 180

Query: 587  IILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILTNGRYKSVLHRVMADEN 408
            IILLLQDDQVPGLEF KDGKWVEIPPS NN IFINTGDQ+E+L+NGRYKS LHRVMAD+N
Sbjct: 181  IILLLQDDQVPGLEFLKDGKWVEIPPSKNNRIFINTGDQLEVLSNGRYKSALHRVMADKN 240

Query: 407  GSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKSTRFKSLKKIAGG 228
            GSRLSIATFYNP GDAIISPAP+LLYP + SFQDYLKLYATTKF DK  RF+S+KK+A G
Sbjct: 241  GSRLSIATFYNPAGDAIISPAPKLLYPSNYSFQDYLKLYATTKFLDKEPRFESMKKMANG 300

Query: 227  QAKLLV 210
               L V
Sbjct: 301  HHGLHV 306


>dbj|BAG15873.1| ACC oxidase [Bruguiera gymnorhiza]
          Length = 306

 Score =  459 bits (1181), Expect = e-127
 Identities = 220/304 (72%), Positives = 254/304 (83%)
 Frame = -2

Query: 1127 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGINVELMEKVKRLVNMHYEEYM 948
            MEIPVI L+  +G+  +KTM LLHQACEKWGFF V NHGI+  LMEKVK+LVN HYEE +
Sbjct: 1    MEIPVIRLDEADGEDRSKTMSLLHQACEKWGFFMVDNHGIDEVLMEKVKQLVNCHYEENL 60

Query: 947  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHRPTSNLHEFTNFSEDLCKAMDEYINQVY 768
            KESFY S+I   L + E   + DWES+FFIWHRP SN+HE      +LCKAMDEYI Q+ 
Sbjct: 61   KESFYESEIANKLNNNENTPDTDWESTFFIWHRPKSNIHEIPKLPGNLCKAMDEYIAQLI 120

Query: 767  KLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELVKGLRAHTDAGG 588
            KLAEKLSELMCENLGLEK +IK+AFSG +GPSVGTKVAKYP+CPQPELV+GLR HTDAGG
Sbjct: 121  KLAEKLSELMCENLGLEKCHIKEAFSGSKGPSVGTKVAKYPQCPQPELVRGLREHTDAGG 180

Query: 587  IILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILTNGRYKSVLHRVMADEN 408
            IILLLQDD+VPGLEF KDG+WVEIPPS NNTIF+NTGDQ+E+L+NGRYKS LHRVMAD+N
Sbjct: 181  IILLLQDDRVPGLEFLKDGEWVEIPPSKNNTIFVNTGDQIEVLSNGRYKSALHRVMADKN 240

Query: 407  GSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKSTRFKSLKKIAGG 228
            GSRLSIATFYNP  DAIISP+P LLYP++ SFQ+YLK YAT+KF DK  RF+ +KK+A G
Sbjct: 241  GSRLSIATFYNPANDAIISPSPRLLYPNNYSFQEYLKHYATSKFADKEPRFEHMKKMANG 300

Query: 227  QAKL 216
               L
Sbjct: 301  SYNL 304


>ref|XP_002514144.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus
            communis] gi|223546600|gb|EEF48098.1|
            1-aminocyclopropane-1-carboxylate oxidase, putative
            [Ricinus communis]
          Length = 308

 Score =  456 bits (1173), Expect = e-126
 Identities = 216/300 (72%), Positives = 255/300 (85%)
 Frame = -2

Query: 1127 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGINVELMEKVKRLVNMHYEEYM 948
            MEIPVID   L G+  +K + +L +ACEKWGFF+V NHGI+ +LMEKVK+LVN HYE+ +
Sbjct: 1    MEIPVIDFSQLKGENRSKMLAVLQEACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEQNL 60

Query: 947  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHRPTSNLHEFTNFSEDLCKAMDEYINQVY 768
            KE+FY S+I K L +K    + DWESS+FIWHRPTSN+++  N  ED  K+MDEYI Q+ 
Sbjct: 61   KETFYKSEIAKRLDNKGNTSDIDWESSYFIWHRPTSNINDIPNLQEDFGKSMDEYITQLI 120

Query: 767  KLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELVKGLRAHTDAGG 588
            +LAEK+SELMCENLGLEKD IK+AFSG  GPSVGTKVAKYPRCPQPELV+GLR HTDAGG
Sbjct: 121  ELAEKISELMCENLGLEKDDIKEAFSGDGGPSVGTKVAKYPRCPQPELVRGLREHTDAGG 180

Query: 587  IILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILTNGRYKSVLHRVMADEN 408
            IILLLQDDQVPGLEF KDG+WVEIPPS NN IF+NTGDQ+E+L+NGRYKS LHRVMAD+N
Sbjct: 181  IILLLQDDQVPGLEFLKDGEWVEIPPSKNNRIFVNTGDQLEVLSNGRYKSTLHRVMADKN 240

Query: 407  GSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKSTRFKSLKKIAGG 228
            GSRLSIATFYNP GDAIISPAP+LLYP++ +FQDYLKLY+TTKF DK  RF+S+KK+  G
Sbjct: 241  GSRLSIATFYNPAGDAIISPAPKLLYPNNYTFQDYLKLYSTTKFLDKGPRFESMKKMTNG 300


Top