BLASTX nr result

ID: Coptis25_contig00018199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018199
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260...   245   7e-63
emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]   245   7e-63
ref|XP_004149065.1| PREDICTED: uncharacterized protein LOC101208...   244   1e-62
ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ...   242   8e-62
ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261...   242   8e-62

>ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera]
           gi|297745306|emb|CBI40386.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  245 bits (626), Expect = 7e-63
 Identities = 130/266 (48%), Positives = 178/266 (66%), Gaps = 4/266 (1%)
 Frame = +1

Query: 13  NYKETKLYYSKLKIQEISKWLDFTPTRTNEVTRMIEEITDGDFGSGNWFSVLVGACCYVI 192
           NYK+ K++ ++  I ++   L F+  ++NEV  M+  IT+G+FG G+WF VLVGAC YV+
Sbjct: 65  NYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRTMVSTITEGEFGQGDWFPVLVGACSYVV 124

Query: 193 MRKDNNLSSLSMSEVAVVIGCELHELGRMVVRVTGYLELELPEFDIVLSFERAIMVCHSF 372
            R+ N   +L ++EV  VIGC+++ELGRM+ RV  +L L+LPE DIV S E A   C S 
Sbjct: 125 RRRSNR--ALPIAEVGAVIGCDVYELGRMIGRVVEFLNLKLPELDIVNSLELAFRKCGSL 182

Query: 373 ENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXXXXXXXLIFVSELNGVEVSFDEVAK 552
             V K D V +M+KQG+FL+  AVKWFLTTGR+        L+FV+ELN V+V  + +A 
Sbjct: 183 NRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPLPMIAAVLMFVAELNQVDVRIENIAN 241

Query: 553 EMRAGVFTCRKRYKEIKEALVKVAQGLPWGNNVTDENIVKNAPGII*YMEIKLRLECGDK 732
           E+ AGV T R RYKE+ EALVKVAQ LPWG++V+ +NIVKNAP +I YME+KLR +   K
Sbjct: 242 EIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSTKNIVKNAPFVIQYMEMKLRSQLSGK 301

Query: 733 ----RKFIXXXXXXXXXXVNECLRKE 798
               +K +          V+ECL+KE
Sbjct: 302 PRKGKKNLERIGFDLDSVVSECLKKE 327


>emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]
          Length = 535

 Score =  245 bits (626), Expect = 7e-63
 Identities = 130/266 (48%), Positives = 178/266 (66%), Gaps = 4/266 (1%)
 Frame = +1

Query: 13  NYKETKLYYSKLKIQEISKWLDFTPTRTNEVTRMIEEITDGDFGSGNWFSVLVGACCYVI 192
           NYK+ K++ ++  I ++   L F+  ++NEV  M+  IT+G+FG G+WF VLVGAC YV+
Sbjct: 65  NYKDKKIFEAQKLIDDLMFKLGFSSEKSNEVRXMVSTITEGEFGQGDWFPVLVGACSYVV 124

Query: 193 MRKDNNLSSLSMSEVAVVIGCELHELGRMVVRVTGYLELELPEFDIVLSFERAIMVCHSF 372
            R+ N   +L ++EV  VIGC+++ELGRM+ RV  +L L+LPE DIV S E A   C S 
Sbjct: 125 RRRSNR--ALPIAEVGAVIGCDVYELGRMIGRVVEFLNLKLPELDIVNSLELAFRKCGSL 182

Query: 373 ENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXXXXXXXLIFVSELNGVEVSFDEVAK 552
             V K D V +M+KQG+FL+  AVKWFLTTGR+        L+FV+ELN V+V  + +A 
Sbjct: 183 NRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPLPMIAAVLMFVAELNQVDVRIENIAN 241

Query: 553 EMRAGVFTCRKRYKEIKEALVKVAQGLPWGNNVTDENIVKNAPGII*YMEIKLRLECGDK 732
           E+ AGV T R RYKE+ EALVKVAQ LPWG++V+ +NIVKNAP +I YME+KLR +   K
Sbjct: 242 EIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSTKNIVKNAPFVIQYMEMKLRSQLSGK 301

Query: 733 ----RKFIXXXXXXXXXXVNECLRKE 798
               +K +          V+ECL+KE
Sbjct: 302 PRKGKKNLERIGFDLDSVVSECLKKE 327


>ref|XP_004149065.1| PREDICTED: uncharacterized protein LOC101208099 [Cucumis sativus]
           gi|449509052|ref|XP_004163479.1| PREDICTED:
           uncharacterized protein LOC101223951 [Cucumis sativus]
          Length = 525

 Score =  244 bits (624), Expect = 1e-62
 Identities = 129/265 (48%), Positives = 179/265 (67%), Gaps = 3/265 (1%)
 Frame = +1

Query: 13  NYKETKLYYSKLKIQEISKWLDFTPTRTNEVTRMIEEITDGDFGSGNWFSVLVGACCYVI 192
           NYK+ K+Y ++  I++I+  L F+ +++N+V  ++  IT+G++G G+WF +LVGAC YV 
Sbjct: 63  NYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVS 122

Query: 193 MRKDNNLSSLSMSEVAVVIGCELHELGRMVVRVTGYLEL---ELPEFDIVLSFERAIMVC 363
           MRKD+    LSMSEVA  + C+LHELGRMV+RV  +L+L   E P FDIV S ERA    
Sbjct: 123 MRKDSR--PLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 364 HSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXXXXXXXLIFVSELNGVEVSFDE 543
            SF   L+ D++ +++KQG FLL CA+KWFLTTGRQ        L+ VS+LN V+VS + 
Sbjct: 181 PSFSR-LEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIEN 239

Query: 544 VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGNNVTDENIVKNAPGII*YMEIKLRLEC 723
           V  E+ A V TC+KRY+E+ EALV+V + LPWG ++T +NIVKNAP +I YME+K   + 
Sbjct: 240 VGMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKA 299

Query: 724 GDKRKFIXXXXXXXXXXVNECLRKE 798
             K K +          V+ECLRKE
Sbjct: 300 SGKGKDLENVEIDLQSAVSECLRKE 324


>ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine
           max]
          Length = 536

 Score =  242 bits (617), Expect = 8e-62
 Identities = 128/265 (48%), Positives = 179/265 (67%), Gaps = 2/265 (0%)
 Frame = +1

Query: 10  FNYKETKLYYSKLKIQEISKWLDFTPTRTNEVTRMIEEITDGDFGSGNWFSVLVGACCYV 189
           ++Y+E KL+ ++  I E++  L  + +++ +V  MI  IT+G+FG G WF VL+GAC YV
Sbjct: 64  YSYRERKLFAAQNLIDEVTNQLGLS-SKSGDVRSMISTITEGEFGQGEWFHVLIGACAYV 122

Query: 190 IMRKDNNLSSLSMSEVAVVIGCELHELGRMVVRVTGYLEL--ELPEFDIVLSFERAIMVC 363
           +MRK++    L M+EVA  IGC+++E+GRM++RV  +L L  + PEFDIV   ER I  C
Sbjct: 123 VMRKEDR--PLPMAEVASAIGCDVYEIGRMILRVVDFLNLRPDFPEFDIVHLLERTIRNC 180

Query: 364 HSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXXXXXXXLIFVSELNGVEVSFDE 543
           + F +V + D++ +M KQG FL+ CAVKW+L+TGR+        L+FV+ELNGV V  +E
Sbjct: 181 NGFASVER-DLIERMRKQGVFLIQCAVKWYLSTGRRPVPLVVAVLVFVAELNGVGVGMEE 239

Query: 544 VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGNNVTDENIVKNAPGII*YMEIKLRLEC 723
           +AKE+ A V TCR RYKE+ E LVKVAQ LPWG +VT +NIVKNAP +I YME K  L+ 
Sbjct: 240 LAKEVHAKVSTCRARYKELLETLVKVAQVLPWGKDVTVKNIVKNAPIVIQYMERKAMLKP 299

Query: 724 GDKRKFIXXXXXXXXXXVNECLRKE 798
           G KR+ +          V ECLR +
Sbjct: 300 GKKREGLDRAAVDLEDVVAECLRND 324


>ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261683 [Vitis vinifera]
           gi|297740496|emb|CBI30678.3| unnamed protein product
           [Vitis vinifera]
          Length = 530

 Score =  242 bits (617), Expect = 8e-62
 Identities = 127/262 (48%), Positives = 175/262 (66%)
 Frame = +1

Query: 13  NYKETKLYYSKLKIQEISKWLDFTPTRTNEVTRMIEEITDGDFGSGNWFSVLVGACCYVI 192
           NYK+ K++ ++  I ++   L F+  ++NEV  M+  IT+G+FG G+W  VLVGAC YV+
Sbjct: 65  NYKDKKIFEAQKLIDDLLFKLGFSSEKSNEVRTMVATITEGEFGQGDWLPVLVGACSYVV 124

Query: 193 MRKDNNLSSLSMSEVAVVIGCELHELGRMVVRVTGYLELELPEFDIVLSFERAIMVCHSF 372
            R+ N   +LS++EV  VIG +++ELG+M+ RV  +L L+LP+ DIV S E A   C S 
Sbjct: 125 RRQSNR--ALSIAEVGSVIGSDVYELGQMIRRVVEFLNLKLPDIDIVNSLELAFGQCGSL 182

Query: 373 ENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXXXXXXXLIFVSELNGVEVSFDEVAK 552
             V K D V KM+KQG FL+ CAVKWFLTTGR+        L+FV+ELN V+V  + +A 
Sbjct: 183 NRVSK-DKVNKMLKQGTFLVQCAVKWFLTTGRRPLPMIAAILMFVAELNQVDVRIENIAN 241

Query: 553 EMRAGVFTCRKRYKEIKEALVKVAQGLPWGNNVTDENIVKNAPGII*YMEIKLRLECGDK 732
           E+ AGV T R RYKE+ EALVKVAQ LPWG +V+ +NI+KNAP +I YME+K RL  G +
Sbjct: 242 EIHAGVATTRLRYKELSEALVKVAQALPWGKDVSTKNIIKNAPFVIQYMEMKSRLLPGKR 301

Query: 733 RKFIXXXXXXXXXXVNECLRKE 798
           R+ +          V++CL KE
Sbjct: 302 RENLESGGFDLDGVVSDCLNKE 323


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