BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018166
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   130   9e-29
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/148 (45%), Positives = 104/148 (70%)
 Frame = -3

Query: 446 MYTWLRSRRFVPSELCFEVLLNLLIEKNKTLLAFRVYIDMIENGFGLGIENMPTVESIVK 267
           +Y  +R R  VPS  C+ VL++ L++ N+  L FRVY+DM+E GF L   +M  +E++++
Sbjct: 225 VYDQMRGRGLVPSLSCYNVLIDHLVQTNEKQLVFRVYLDMVEMGFDLSNADMANLENVIR 284

Query: 266 LLCKKRKVKEARNVVRKLVASGIEPSRAILNLVANGYSEKKDFDDLLNFLKERKFAPDVP 87
           LLC+  K++E R++V+K++  G+ PS  IL+ +ANGY EKKDF+D L+F  E   AP V 
Sbjct: 285 LLCRDGKIQEGRSLVKKVMGLGLNPSSLILDEIANGYCEKKDFEDALSFFVEMNCAPSVV 344

Query: 86  VCHKILFSQCKYFGSEQAYVFMLELESL 3
           V +KI++S C+ FG+E+A +F+ ELE L
Sbjct: 345 VGNKIMYSLCRDFGTERADLFLQELEHL 372


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/148 (45%), Positives = 104/148 (70%)
 Frame = -3

Query: 446 MYTWLRSRRFVPSELCFEVLLNLLIEKNKTLLAFRVYIDMIENGFGLGIENMPTVESIVK 267
           +Y  +R R  VPS  C+ VL++ L++ N+  L FRVY+DM+E GF L   +M  +E++++
Sbjct: 242 VYDQMRGRGLVPSLSCYNVLIDHLVQTNEKQLVFRVYLDMVEMGFDLSNADMANLENVIR 301

Query: 266 LLCKKRKVKEARNVVRKLVASGIEPSRAILNLVANGYSEKKDFDDLLNFLKERKFAPDVP 87
           LLC+  K++E R++V+K++  G+ PS  IL+ +ANGY EKKDF+D L+F  E   AP V 
Sbjct: 302 LLCRDGKIQEGRSLVKKVMGLGLNPSSLILDEIANGYCEKKDFEDALSFFVEMNCAPSVV 361

Query: 86  VCHKILFSQCKYFGSEQAYVFMLELESL 3
           V +KI++S C+ FG+E+A +F+ ELE L
Sbjct: 362 VGNKIMYSLCRDFGTERADLFLQELEHL 389


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/148 (41%), Positives = 98/148 (66%)
 Frame = -3

Query: 446 MYTWLRSRRFVPSELCFEVLLNLLIEKNKTLLAFRVYIDMIENGFGLGIENMPTVESIVK 267
           MY  ++ +  VPS  C+  L+NLL+    T L FR+ +DM+E+   L    + ++E +V+
Sbjct: 163 MYDRMQEQNLVPSLFCYHGLINLLVRMRSTQLVFRICLDMVEHEINLSHREITSIEKVVR 222

Query: 266 LLCKKRKVKEARNVVRKLVASGIEPSRAILNLVANGYSEKKDFDDLLNFLKERKFAPDVP 87
           LLC+   V+EARN++RK++A G EPS  ++N +A+GY  KKDF+DLL+F  + K +P++ 
Sbjct: 223 LLCEDEMVQEARNIMRKVMALGFEPSSTLINEIASGYFVKKDFEDLLSFFVQMKRSPNLW 282

Query: 86  VCHKILFSQCKYFGSEQAYVFMLELESL 3
           V +KI+   C  +G E+A +F LELE L
Sbjct: 283 VGNKIICGICSIYGVERANLFRLELEDL 310


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1225

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/146 (45%), Positives = 95/146 (65%)
 Frame = -3

Query: 446 MYTWLRSRRFVPSELCFEVLLNLLIEKNKTLLAFRVYIDMIENGFGLGIENMPTVESIVK 267
           +Y  +R R   PS  C+  LL+ L++K KT +A  V  DM+E GFGLG E   + +++++
Sbjct: 213 IYEKVRRRCNSPSLSCYHALLDSLVQKKKTQVALAVCTDMVEMGFGLGDEEKASFDNVIR 272

Query: 266 LLCKKRKVKEARNVVRKLVASGIEPSRAILNLVANGYSEKKDFDDLLNFLKERKFAPDVP 87
           LLC +  V EARN+V+K VA    PS  +L  +  GY +KKDF+DLL+F  E K  P+V 
Sbjct: 273 LLCWQGNVLEARNLVKKFVALDFRPSDEVLYQITRGYCDKKDFEDLLSFFFEIKTPPNVS 332

Query: 86  VCHKILFSQCKYFGSEQAYVFMLELE 9
             +KI++S CK FGSE AY+F+ ELE
Sbjct: 333 SGNKIIYSLCKDFGSESAYLFLRELE 358


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1246

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/146 (45%), Positives = 95/146 (65%)
 Frame = -3

Query: 446 MYTWLRSRRFVPSELCFEVLLNLLIEKNKTLLAFRVYIDMIENGFGLGIENMPTVESIVK 267
           +Y  +R R   PS  C+  LL+ L++K KT +A  V  DM+E GFGLG E   + +++++
Sbjct: 213 IYEKVRRRCNSPSLSCYHALLDSLVQKKKTQVALAVCTDMVEMGFGLGDEEKASFDNVIR 272

Query: 266 LLCKKRKVKEARNVVRKLVASGIEPSRAILNLVANGYSEKKDFDDLLNFLKERKFAPDVP 87
           LLC +  V EARN+V+K VA    PS  +L  +  GY +KKDF+DLL+F  E K  P+V 
Sbjct: 273 LLCWQGNVLEARNLVKKFVALDFRPSDEVLYQITRGYCDKKDFEDLLSFFFEIKTPPNVS 332

Query: 86  VCHKILFSQCKYFGSEQAYVFMLELE 9
             +KI++S CK FGSE AY+F+ ELE
Sbjct: 333 SGNKIIYSLCKDFGSESAYLFLRELE 358